Gene SNSL254_A2555 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSNSL254_A2555 
Symbol 
ID6482665 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSalmonella enterica subsp. enterica serovar Newport str. SL254 
KingdomBacteria 
Replicon accessionNC_011080 
Strand
Start bp2478724 
End bp2479383 
Gene Length660 bp 
Protein Length219 aa 
Translation table11 
GC content51% 
IMG OID642737890 
Producthypothetical protein 
Protein accessionYP_002041631 
Protein GI194444175 
COG category[S] Function unknown 
COG ID[COG0586] Uncharacterized membrane-associated protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones12 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones81 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGACCTGA TCTACTTTAT TATTGATTTT ATTCTGCACA TCGATGTGCA TCTGGCGGAG 
CTGGTCGCGG AGTACGGCGT CTGGGTGTAC GCTATTTTGT TTTTGATTCT GTTTTGTGAA
ACCGGCCTGG TCGTCACGCC GTTCCTGCCG GGCGACTCGC TGCTGTTTGT CGCCGGGGCG
CTGGCTTCGC TGGAAACCAA CGATCTCAAT GTGCATGTCA TGGTGGCGTT AATGCTGATC
GCCGCAATTG TCGGCGATGC GGTAAATTAC ACGATTGGTC GACTGTTCGG CGAAAAACTG
TTCAGTAATC CGAATTCGAA AATTTTCCGC CGCAGTTATC TGGATAAAAC CCACCAGTTT
TATGAAAAAC ACGGCGGTAA AACTATCATT CTCGCTCGCT TCGTGCCGAT CGTCAGAACT
TTTGCGCCGT TTGTGGCAGG GATGGGGCAC ATGTCCTATC GGCATTTTGC CGCCTATAAC
GTCATCGGCG CGCTGCTGTG GGTGCTGCTC TTTACCTACG CCGGTTATTT CTTCGGTACG
ATACCGTTGA TTCAGGATAA CCTTAAGCTG CTGATTGTGG GGATTATCGT GGTTTCGATA
TTACCTGGCG TCATTGAGAT TGTCCGGCAT AAGCGCGCTG CGTCGCGTGC CGCAAAATAG
 
Protein sequence
MDLIYFIIDF ILHIDVHLAE LVAEYGVWVY AILFLILFCE TGLVVTPFLP GDSLLFVAGA 
LASLETNDLN VHVMVALMLI AAIVGDAVNY TIGRLFGEKL FSNPNSKIFR RSYLDKTHQF
YEKHGGKTII LARFVPIVRT FAPFVAGMGH MSYRHFAAYN VIGALLWVLL FTYAGYFFGT
IPLIQDNLKL LIVGIIVVSI LPGVIEIVRH KRAASRAAK