Gene SNSL254_A2547 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSNSL254_A2547 
Symbol 
ID6484328 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSalmonella enterica subsp. enterica serovar Newport str. SL254 
KingdomBacteria 
Replicon accessionNC_011080 
Strand
Start bp2468723 
End bp2470144 
Gene Length1422 bp 
Protein Length473 aa 
Translation table11 
GC content50% 
IMG OID642737882 
Productputative amino acid transporter 
Protein accessionYP_002041623 
Protein GI194442695 
COG category[E] Amino acid transport and metabolism 
COG ID[COG0531] Amino acid transporters 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones17 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones80 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAGTAACA CGAATTCTGG CTTACTTGGC ATCAAAGACA TTGTCTTTAT GAATGTCATC 
GCTATTCTGA GTTTGCGGCA AATCCCTAAC GTGGCGCCTT ACGGGGCATC GGCCATGTTG
TTATGGGTGA TAGCCGCATT CTGCTTGTTT TTTCCTTTAG CGATGGTATG CGGCGAGCTG
TCAACCGGCT GGCCGAAAGA TGGCGGGATA TTTGTCTGGA TTAAAGAGGC ATTTGGTAAA
CGTATTGCAT GGATTGTCGT GGTTTGTTTT CTCTTTTCCT GCGTACTGTT TTTCCCATTA
ATGCTGCAAT TCGGCTTTAC CGCGTTGGGC TATATGATCG GCGGCGGCCT GGCGGAAAAT
AAAGCATTTA TCGGTATTGG TTCCGCGGTA ATTTTCTGGC TATTAACGCT GATGAATATC
CGCGGGATGG AATGGACAAA AATTATTAAT AGCATCAGCG CCTGGTGCGG CGTATTTATT
CCCTCCGCCA TCCTCATTTT ACTGGCGGTG GTATGGCTAT GTACCGGACA CCAGATGCAG
ACGGACTACA CTACAGCGAA AAACTGGATT CCGGATCTCG GGCACTGGGA TACGATCGTT
TTCTTATCCA GCATGATGTT TGCGTTTGCC GGACTGGAGG TCGCCCCGAT GATTGCCGGG
CGTACCCGTA ATCCACAGCG TGATTTTCCG CGAGCGATGG CCGTCTCTGC CGCCGTTATC
GTTGGAATCT ATATGGTTGG CACCTGGGCG CTAAATACGC TTTTACCCGC CGGGAAAACC
GACATCGTGG CAGGCGTCAT GCAGGCTATG CATGCTGCTG CGGATACGCT GCATATGCCG
TGGTTAATTC CTGTTATGGC CATCTGTATG TTTTTTGGCG CTCTCGGGCA GATTAACTCC
TGGCTGGTGG GGCCGATTTA TATGCTCCAG GAAGCCTCGC GTGAAGATAA TCTGCTGGGG
GACCGAATCG GCAAATTACA TCCGGTGTGG AAAACGCCCG CCTTTGCCTT GACTGTACAG
GCGATTATTG TCACGGTCCT GTGTTTTTCG ACTTTTATTT CGCCAAGCGT TGCGGCGGCT
TACTGGATGT TAACAGCGCT AACGACCATC ACCTATTTTA TTCCTTATCT GGTGATGTTC
CCGGCGTTCT GGCGTTTACG TAAGACTCAG CCAGATACGC CAAGAAGTTT TAAAATTCCG
GGCAAGGTTT TACCGGCTAT TTTACCCGCG CTGGGCTTTC TTTCTATCGC CTTTGCCGTT
GCGCTGTTAT TTATTCCGCC TTCTCAAATT GATATGGGCG GATATTTCCA GTACGCCGGG
AAAATTATTG GCGGAGCCGT GCTGGCGGTT GTCGTCGCGG AGTACATTTA CCATCGGGCG
CAGAAACGTA ATGCCCGTTT AAGCATGGCG GGAGGAAAAT AA
 
Protein sequence
MSNTNSGLLG IKDIVFMNVI AILSLRQIPN VAPYGASAML LWVIAAFCLF FPLAMVCGEL 
STGWPKDGGI FVWIKEAFGK RIAWIVVVCF LFSCVLFFPL MLQFGFTALG YMIGGGLAEN
KAFIGIGSAV IFWLLTLMNI RGMEWTKIIN SISAWCGVFI PSAILILLAV VWLCTGHQMQ
TDYTTAKNWI PDLGHWDTIV FLSSMMFAFA GLEVAPMIAG RTRNPQRDFP RAMAVSAAVI
VGIYMVGTWA LNTLLPAGKT DIVAGVMQAM HAAADTLHMP WLIPVMAICM FFGALGQINS
WLVGPIYMLQ EASREDNLLG DRIGKLHPVW KTPAFALTVQ AIIVTVLCFS TFISPSVAAA
YWMLTALTTI TYFIPYLVMF PAFWRLRKTQ PDTPRSFKIP GKVLPAILPA LGFLSIAFAV
ALLFIPPSQI DMGGYFQYAG KIIGGAVLAV VVAEYIYHRA QKRNARLSMA GGK