Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | SNSL254_A2516 |
Symbol | |
ID | 6483846 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Salmonella enterica subsp. enterica serovar Newport str. SL254 |
Kingdom | Bacteria |
Replicon accession | NC_011080 |
Strand | + |
Start bp | 2440953 |
End bp | 2442167 |
Gene Length | 1215 bp |
Protein Length | 404 aa |
Translation table | 11 |
GC content | 51% |
IMG OID | 642737851 |
Product | aminotransferase AlaT |
Protein accession | YP_002041592 |
Protein GI | 194445955 |
COG category | [E] Amino acid transport and metabolism |
COG ID | [COG0436] Aspartate/tyrosine/aromatic aminotransferase |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 4 |
Plasmid unclonability p-value | 0.0408382 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 61 |
Fosmid unclonability p-value | 0.443228 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGTCCCCCA TTGAAAAATC CAGCAAACTC GAAAATGTCT GTTATGACAT TCGTGGCCCC GTTCTGAAAG AAGCGAAACG CCTTGAGGAA GAAGGTAATA AAGTTCTTAA ACTGAATATC GGCAACCCCG CCCCCTTCGG ATTCGAAGCG CCGGACGAAA TTCTGGTCGA TGTCATTCGT AATTTGCCGA CGGCGCAAGG ATATTGCGAC TCGAAAGGGC TTTATTCTGC CCGTAAAGCG ATTATGCAGC ATTATCAGGC CCGTGGAATG CGCGATGTAA CCGTGGAAGA TATCTATATC GGTAACGGCG TTTCCGAGCT GATCGTTCAG GCGATGCAGG CGTTGCTTAA CAGTGGCGAT GAAATGCTGG TTCCCGCGCC CGATTATCCG TTATGGACAG CGGCGGTATC GCTCTCCAGC GGCAAGGCGG TACATTATCT TTGCGATGAA TCTTCCGACT GGTTCCCGGA CCTTGACGAT ATCCGCGCCA AAATCACCCC ACGTACGCGT GGTATTGTCA TTATTAATCC AAACAACCCT ACTGGCGCCG TCTATTCTAA AGAATTGTTG ATGGAAATTG TCAACATTGC GCGCGAGCAT AATCTCATCA TCTTCGCCGA TGAAATTTAT GACAAGATTC TCTATGACGA TGCCGAGCAT CACTCTATCG CCGCACTGGC ACCTGATCTG CTGACCATCA CCTTTAATGG GTTGTCTAAA ACCTATCGCG TCGCCGGCTT CCGCCAGGGC TGGATGGTGC TGAACGGGCC GAAAAAACAT GCGAAGGGCT ATATTGAAGG GCTGGAGATG TTAGCCTCAA TGCGCCTGTG CGCCAACGTC CCGGCGCAAC ATGCTATTCA GACCGCGCTC GGCGGCTATC AAAGCATTAG CGAATTTATT CTGCCGGGCG GTCGACTGTA TGAACAGCGT AACCGAGCCT GGGAGTTGAT TAACGATATT CCCGGCGTTT CCTGCGTAAA ACCGCGCGGC GCGTTGTACA TGTTCCCCAG GATCGACGCT AAACGTTTTA ATATTCACGA CGACCAGAAG ATGGTGCTGG ACTTCCTGCT ACAGGAAAAG GTGCTGCTGG TGCAAGGTAC CGCCTTTAAC TGGCCGTGGC CGGATCACTT CCGCATTGTG ACGCTACCGC GTGAAGATGA CCTGGAGATG GCCATCAACC GTTTTGGGCG TTTCCTCTCA GGTTACCATC AATAA
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Protein sequence | MSPIEKSSKL ENVCYDIRGP VLKEAKRLEE EGNKVLKLNI GNPAPFGFEA PDEILVDVIR NLPTAQGYCD SKGLYSARKA IMQHYQARGM RDVTVEDIYI GNGVSELIVQ AMQALLNSGD EMLVPAPDYP LWTAAVSLSS GKAVHYLCDE SSDWFPDLDD IRAKITPRTR GIVIINPNNP TGAVYSKELL MEIVNIAREH NLIIFADEIY DKILYDDAEH HSIAALAPDL LTITFNGLSK TYRVAGFRQG WMVLNGPKKH AKGYIEGLEM LASMRLCANV PAQHAIQTAL GGYQSISEFI LPGGRLYEQR NRAWELINDI PGVSCVKPRG ALYMFPRIDA KRFNIHDDQK MVLDFLLQEK VLLVQGTAFN WPWPDHFRIV TLPREDDLEM AINRFGRFLS GYHQ
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