| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | SNSL254_A2514 |
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| Symbol | |
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| ID | 6485249 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Salmonella enterica subsp. enterica serovar Newport str. SL254 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011080 |
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| Strand | - |
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| Start bp | 2439083 |
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| End bp | 2440021 |
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| Gene Length | 939 bp |
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| Protein Length | 312 aa |
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| Translation table | 11 |
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| GC content | 53% |
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| IMG OID | 642737849 |
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| Product | HTH-type transcriptional regulator PecT |
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| Protein accession | YP_002041590 |
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| Protein GI | 194443054 |
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| COG category | [K] Transcription |
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| COG ID | [COG0583] Transcriptional regulator |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 1 |
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| Plasmid unclonability p-value | 0.00051335 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | decreased coverage |
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Fosmid Coverage information |
| Num covering fosmid clones | 64 |
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| Fosmid unclonability p-value | 0.704874 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGATAAATG CAAATCGTCC GATAATTAAC CTCGATCTCG ATCTGCTGAG AACGTTCGTG
GCCGTTGCCG ATCTGAACAC CTTCGCCGCG GCGGCGGCGG CGGTATGTCG TACTCAGTCT
GCGGTCAGTC AGCAAATGCA GCGTCTTGAG CAACTCGTGG GAAAGGAATT GTTCGCCCGC
CATGGCCGTA ACAAACTTTT GACCGAACAC GGTATCCAGC TTCTGGGGTA CGCCAGAAAA
ATCCTGCGTT TTAATGATGA GGCGTGTTCA TCATTAATGT TCAGTAATCT TCAGGGAGTG
TTAACAATCG GCGCTTCTGA TGAATCAGCT GATACTATCC TGCCTTTTTT GCTTAGCCGA
ATCAGCTCGG TTTATCCGAA ACTCGCGCTT GATGTACGGG TAAAACGCAA CGCCTATATG
GTGGACATGG TTAAATCGCA GGAAGTAGAT TTGGTGGTGA CGACTAACCA ACCTCATTCG
CTGGACTGTC TGAATTTGCG GACCTCGCCC ACCCATTGGT ATTGTGCGGC TGAGTATGTT
TTGCAAAGGG GAGAGCCCGT ACCACTAGTC CTGCTGGACG ATCCCAGTCC ATTCCGCGAT
ATGGTGCTGG AGACGCTAAA TGCAGCGGGT ATTCCCTGGC GGCTGGCCTA TGTGGCGTCT
ACATTACCGG CGGTACGCGC GGCCGTTAAA GCCGGTCTTG GCGTAACGGC TCGACCTGTC
GAAATGATGA GTCCCGACCT TCGCGTGCTG GGCGCCGCAG ACGGATTACC GCCTTTGCCG
GATACGGAAT ATCTGTTGTG CCGCGATCCC AATAGCCAGA ACGAGCTGGC GATGGTGATT
TTCCATGCGA TGGAAAGCTA TCAAAACCCA TGGCATTACA ACCAGTTTTC TGCAGAGGGT
GGAGATGATC CGCTGATGGT GGAAGGGGGT TTTGAGTAG
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| Protein sequence | MINANRPIIN LDLDLLRTFV AVADLNTFAA AAAAVCRTQS AVSQQMQRLE QLVGKELFAR
HGRNKLLTEH GIQLLGYARK ILRFNDEACS SLMFSNLQGV LTIGASDESA DTILPFLLSR
ISSVYPKLAL DVRVKRNAYM VDMVKSQEVD LVVTTNQPHS LDCLNLRTSP THWYCAAEYV
LQRGEPVPLV LLDDPSPFRD MVLETLNAAG IPWRLAYVAS TLPAVRAAVK AGLGVTARPV
EMMSPDLRVL GAADGLPPLP DTEYLLCRDP NSQNELAMVI FHAMESYQNP WHYNQFSAEG
GDDPLMVEGG FE
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