Gene SNSL254_A2497 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSNSL254_A2497 
Symbol 
ID6482368 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSalmonella enterica subsp. enterica serovar Newport str. SL254 
KingdomBacteria 
Replicon accessionNC_011080 
Strand
Start bp2421313 
End bp2422338 
Gene Length1026 bp 
Protein Length341 aa 
Translation table11 
GC content55% 
IMG OID642737833 
Productribonuclease Z 
Protein accessionYP_002041574 
Protein GI194444117 
COG category[R] General function prediction only 
COG ID[COG1234] Metal-dependent hydrolases of the beta-lactamase superfamily III 
TIGRFAM ID[TIGR02649] ribonuclease BN
[TIGR02651] ribonuclease Z 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.883053 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones85 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
TTGAGGAACG GTAAGTTCGC TATGGTGGAG ATCCTGCCAG TCAATCATGA TGCGCTCCTG 
TGTTGTGGTA ATCTTGGGTT AAACGATAAC CAAACGTGTA TGGACAAGAT GGAATTAATT
TTTTTAGGTA CGTCCGCAGG CGTTCCCACG CGCTCACGCA ATGTAACGGC AATTTTATTA
CATCTGCAAC ATCCAACGCA GCCGGGAGTA TGGCTTTTTG ATTGCGGCGA AGGGACACAG
CATCAAATGC TTAATACCGC GTTTCATCCC GGTAAGCTTG AGCGCATTTT TATCAGCCAT
CTTCACGGCG ATCATTTGTT TGGCCTGCCG GGTCTGCTAT GCAGCCGGTC GATGGCGGGG
AACCCCCATC CGCTAACCGT ATACGGACCT CAAGGCGTGC GTGAGTTTAT TGCAACCACA
CTGCGTCTTA GCGGTTCATG GACCGATTTT CCGTTGCAAA TTGAAGAAAT TAGCGCAGGT
GATATTCTTG ACGACGGTCT GCGTAAAGTG ACCGCGTTCA GGCTGGAGCA TCCACTGGAG
TGCTACGGAT ATCGCGTTGT TGAACATGAC AAGCCTGGCG CGCTGAATGC CAGGGCGTTA
AAAGCCGCAG GCGTTACGCC CGGCCCGCTG TTTCAAGCGT TGAAGGCAGG AAAAACCGTC
ACGCTTGCCG ATGGAAGGCA GATCAATGGC GCCGACTACC TTGCTCCCGC CGTGGCCGGG
AAATCAGTGG CGATTTTCGG CGATACCGCG CCCTGCGAGG CCGCCCTCGC GCTGGCGCAA
GGCGTGGATG TGATGGTCCA TGAAACCACG CTGGATGCGT CAATGGAGGA GAAAGCCAAC
GCTCGCGGAC ACAGCTCCAC CCGTCAAACC GCGACGCTGG CGCGGGAAGC TGCCGTTGGT
CGGCTGATCA TGACCCATAT TAGCTCACGC TATGACGATA AAGGCTGTCA GCGCTTACTG
GCGGAATGCC GCGCTATTTT CCCGGCGACG GAGCTGGCTT ACGATTTTTC TGTTTTCCCG
GTTTAG
 
Protein sequence
MRNGKFAMVE ILPVNHDALL CCGNLGLNDN QTCMDKMELI FLGTSAGVPT RSRNVTAILL 
HLQHPTQPGV WLFDCGEGTQ HQMLNTAFHP GKLERIFISH LHGDHLFGLP GLLCSRSMAG
NPHPLTVYGP QGVREFIATT LRLSGSWTDF PLQIEEISAG DILDDGLRKV TAFRLEHPLE
CYGYRVVEHD KPGALNARAL KAAGVTPGPL FQALKAGKTV TLADGRQING ADYLAPAVAG
KSVAIFGDTA PCEAALALAQ GVDVMVHETT LDASMEEKAN ARGHSSTRQT ATLAREAAVG
RLIMTHISSR YDDKGCQRLL AECRAIFPAT ELAYDFSVFP V