Gene SNSL254_A2471 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSNSL254_A2471 
SymbolglpC 
ID6483001 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSalmonella enterica subsp. enterica serovar Newport str. SL254 
KingdomBacteria 
Replicon accessionNC_011080 
Strand
Start bp2394872 
End bp2396062 
Gene Length1191 bp 
Protein Length396 aa 
Translation table11 
GC content54% 
IMG OID642737806 
Productsn-glycerol-3-phosphate dehydrogenase subunit C 
Protein accessionYP_002041547 
Protein GI194444150 
COG category[C] Energy production and conversion 
COG ID[COG0247] Fe-S oxidoreductase 
TIGRFAM ID[TIGR03379] glycerol-3-phosphate dehydrogenase, anaerobic, C subunit 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.496093 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones65 
Fosmid unclonability p-value0.69733 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAGCGACA CACGTTTTGA AAGTTGTATT AAATGTACGG TGTGCACCAC CGCGTGCCCG 
GTCAGCCGCG TTAATCCTGG CTACCCTGGC CCTAAACAGG CCGGACCGGA TGGCGAGCGC
CTGCGTCTGA AAGACGGCGC ACTGTATGAT GAGGCGCTGA AATATTGCAT TAACTGCAAA
CGGTGTGAGG TCGCCTGTCC GTCGGACGTG AAGATTGGCG ATATCATCCA GCGCGCCCGC
GCGAAATACG ATACGACGCG CCCGTCATTG CGTAATTTTA TTCTCAGCCA TACCGATCTG
ATGGGCAGCG TTTCAACGCC GTTCGCGCCG GTGGTCAATA CCGCCACCGC ATTAAAGCCA
GTGCGCCAGT TGCTTGATTA CGCGCTCAAA ATCGATCATC GCCGCACCTT ACCAAAATAC
TCTTTCGGCA CCTTCCGCCG CTGGTATCGT AGCGTGGCGG CGCAGCAGGC TAAATACAAA
GATCAGGTCG CCTTTTTCCA TGGCTGTTTT GTGAATTACA ACCATCCGCA GCTCGGAAAA
GATCTGATTA AGGTGCTGAA CGCAATGGGT ACTGGCGTAC AGTTACTGAG TAAAGAGAAG
TGTTGCGGCG TACCGCTGAT CGCTAACGGT TTTACGGATA AAGCTCGCAA ACAGGCTATC
AGCAATGTGG AGTCGCTACG CGAGGCGATT GCCGTCAAAG GTATTCCGGT CATCGCCACG
TCATCCACCT GTACGTTTGC GTTGCGCGAT GAATATCCTG AAGTGCTGGA CGTGGACAAC
GCCGGGCTGC GCGAACATAT CGAGCTGGCC ACCCGCTGGC TATGGCGCAA ACTGGATGCC
GGGAAAACGC TGCCGCTTAA TCCTTTACCG CTGAAAGTGG TCTACCATAC GCCGTGTCAT
ATGGAAAAAA TGGGCTGGAC GCTTTACACG CTTGAACTGT TGCGGCAAAT TCCGGGGCTT
GAATTGACGG TACTTGATTC ACAGTGCTGC GGCATTGCCG GTACGTATGG ATTTAAAAAG
GAAAACTATC CGACATCACA GTCCATCGGC GCGCCACTGT TCCGCCAGAT TGAAGAGAGC
GGCGCCGACA TTATCGTCAC CGATTGTGAA ACCTGTAAGT GGCAAATTGA GATGTCTACA
AGCAAACGCT GCGAACACCC CATTACGCTA CTGGCCCAGG CGCTCGGCTA A
 
Protein sequence
MSDTRFESCI KCTVCTTACP VSRVNPGYPG PKQAGPDGER LRLKDGALYD EALKYCINCK 
RCEVACPSDV KIGDIIQRAR AKYDTTRPSL RNFILSHTDL MGSVSTPFAP VVNTATALKP
VRQLLDYALK IDHRRTLPKY SFGTFRRWYR SVAAQQAKYK DQVAFFHGCF VNYNHPQLGK
DLIKVLNAMG TGVQLLSKEK CCGVPLIANG FTDKARKQAI SNVESLREAI AVKGIPVIAT
SSTCTFALRD EYPEVLDVDN AGLREHIELA TRWLWRKLDA GKTLPLNPLP LKVVYHTPCH
MEKMGWTLYT LELLRQIPGL ELTVLDSQCC GIAGTYGFKK ENYPTSQSIG APLFRQIEES
GADIIVTDCE TCKWQIEMST SKRCEHPITL LAQALG