Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | SNSL254_A2471 |
Symbol | glpC |
ID | 6483001 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Salmonella enterica subsp. enterica serovar Newport str. SL254 |
Kingdom | Bacteria |
Replicon accession | NC_011080 |
Strand | + |
Start bp | 2394872 |
End bp | 2396062 |
Gene Length | 1191 bp |
Protein Length | 396 aa |
Translation table | 11 |
GC content | 54% |
IMG OID | 642737806 |
Product | sn-glycerol-3-phosphate dehydrogenase subunit C |
Protein accession | YP_002041547 |
Protein GI | 194444150 |
COG category | [C] Energy production and conversion |
COG ID | [COG0247] Fe-S oxidoreductase |
TIGRFAM ID | [TIGR03379] glycerol-3-phosphate dehydrogenase, anaerobic, C subunit |
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Plasmid Coverage information |
Num covering plasmid clones | 7 |
Plasmid unclonability p-value | 0.496093 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 65 |
Fosmid unclonability p-value | 0.69733 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAGCGACA CACGTTTTGA AAGTTGTATT AAATGTACGG TGTGCACCAC CGCGTGCCCG GTCAGCCGCG TTAATCCTGG CTACCCTGGC CCTAAACAGG CCGGACCGGA TGGCGAGCGC CTGCGTCTGA AAGACGGCGC ACTGTATGAT GAGGCGCTGA AATATTGCAT TAACTGCAAA CGGTGTGAGG TCGCCTGTCC GTCGGACGTG AAGATTGGCG ATATCATCCA GCGCGCCCGC GCGAAATACG ATACGACGCG CCCGTCATTG CGTAATTTTA TTCTCAGCCA TACCGATCTG ATGGGCAGCG TTTCAACGCC GTTCGCGCCG GTGGTCAATA CCGCCACCGC ATTAAAGCCA GTGCGCCAGT TGCTTGATTA CGCGCTCAAA ATCGATCATC GCCGCACCTT ACCAAAATAC TCTTTCGGCA CCTTCCGCCG CTGGTATCGT AGCGTGGCGG CGCAGCAGGC TAAATACAAA GATCAGGTCG CCTTTTTCCA TGGCTGTTTT GTGAATTACA ACCATCCGCA GCTCGGAAAA GATCTGATTA AGGTGCTGAA CGCAATGGGT ACTGGCGTAC AGTTACTGAG TAAAGAGAAG TGTTGCGGCG TACCGCTGAT CGCTAACGGT TTTACGGATA AAGCTCGCAA ACAGGCTATC AGCAATGTGG AGTCGCTACG CGAGGCGATT GCCGTCAAAG GTATTCCGGT CATCGCCACG TCATCCACCT GTACGTTTGC GTTGCGCGAT GAATATCCTG AAGTGCTGGA CGTGGACAAC GCCGGGCTGC GCGAACATAT CGAGCTGGCC ACCCGCTGGC TATGGCGCAA ACTGGATGCC GGGAAAACGC TGCCGCTTAA TCCTTTACCG CTGAAAGTGG TCTACCATAC GCCGTGTCAT ATGGAAAAAA TGGGCTGGAC GCTTTACACG CTTGAACTGT TGCGGCAAAT TCCGGGGCTT GAATTGACGG TACTTGATTC ACAGTGCTGC GGCATTGCCG GTACGTATGG ATTTAAAAAG GAAAACTATC CGACATCACA GTCCATCGGC GCGCCACTGT TCCGCCAGAT TGAAGAGAGC GGCGCCGACA TTATCGTCAC CGATTGTGAA ACCTGTAAGT GGCAAATTGA GATGTCTACA AGCAAACGCT GCGAACACCC CATTACGCTA CTGGCCCAGG CGCTCGGCTA A
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Protein sequence | MSDTRFESCI KCTVCTTACP VSRVNPGYPG PKQAGPDGER LRLKDGALYD EALKYCINCK RCEVACPSDV KIGDIIQRAR AKYDTTRPSL RNFILSHTDL MGSVSTPFAP VVNTATALKP VRQLLDYALK IDHRRTLPKY SFGTFRRWYR SVAAQQAKYK DQVAFFHGCF VNYNHPQLGK DLIKVLNAMG TGVQLLSKEK CCGVPLIANG FTDKARKQAI SNVESLREAI AVKGIPVIAT SSTCTFALRD EYPEVLDVDN AGLREHIELA TRWLWRKLDA GKTLPLNPLP LKVVYHTPCH MEKMGWTLYT LELLRQIPGL ELTVLDSQCC GIAGTYGFKK ENYPTSQSIG APLFRQIEES GADIIVTDCE TCKWQIEMST SKRCEHPITL LAQALG
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