Gene SNSL254_A2406 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSNSL254_A2406 
Symbol 
ID6483859 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSalmonella enterica subsp. enterica serovar Newport str. SL254 
KingdomBacteria 
Replicon accessionNC_011080 
Strand
Start bp2322705 
End bp2323718 
Gene Length1014 bp 
Protein Length337 aa 
Translation table11 
GC content55% 
IMG OID642737745 
Productcobalamin synthesis protein P47K 
Protein accessionYP_002041487 
Protein GI194444356 
COG category[R] General function prediction only 
COG ID[COG0523] Putative GTPases (G3E family) 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones15 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones36 
Fosmid unclonability p-value0.000018505 
Fosmid HitchhikerYes 
Fosmid clonabilityhitchhiker 
 

Sequence

Gene sequence
ATGTTGTATC AATATTCTGG AGCTGACGTG ACCAAAACCA ATCTTATTAC TGGATTTCTC 
GGTAGTGGAA AAACCACCTC TATCCTTCAT TTATTAGCTC ATAAAGATCC GGCTGAAAAG
TGGGCCGTCC TGGTTAATGA ATTTGGTGAA GTGGGTATTG ACGGCGCGCT GCTTGCCGAC
AGCGGCGCAC TGCTAAAAGA GATCCCCGGC GGCTGCATGT GCTGCGTCAA TGGATTGCCT
ATGCAGGTGG GGCTCAACAC GCTGCTGCGC CAGGGCAAAC CTGACCGGTT GCTGATTGAA
CCAACCGGAC TGGGACACCC AAAACAGATT CTGGATTTAT TAACTGCGCC GGTTTATGAG
CCGTGGATTG ATTTACGCGC CACGCTCTGC ATCCTTGACC CTCGCCTGCT ACTGGACCAA
CAGAGCGTCG CCAATGAAAA TTTCCGCGAT CAGCTCGCCT CAGCCGATAT TATCATCGCC
AATAAGACCG ATCGCGCCAC GGCGCAGAGC GATGCCGCCC TGCAACAGTG GTGGCGACAG
TACGGCGGCG ATCGTCAACT GATTCATGCC GAACATGGAC AGATAGACGG TAAGCTTCTT
GATTTACCAC GGCAAAATCT GGCGGAACTG CCGGCCAGCG CCGCGCATTC TCACACTCAT
ACCAGTAAAA AAGGACTCGC CGCGCTAAAT CTGCCCGCCC AGCAGCGCTG GCGACGCAGC
CTCAATAGCG GACAGGGTCA TCAGGCCTGC GGCTGGATTT TCGATGCCGA TACCGTGTTT
GACACCATTG GCCTACTCGA ATGGGCGCGT CTGGCGCCGG TGGGCCGGGT GAAAGGCGTT
ATGCGCATAC AAGAGGGGCT GGTACGCATC AATCGCCAGG GCGATGACCT GCACATCGAA
ACACAGAGTG TCGCGCCGCC GGATAGCCGG GTTGAACTTA TCTCAAACAC AGAAACCGAC
TGGAATACGT TACAGACGGC CTTGTTGAAG CTTCGTTTAG CGACGCACGC GTAA
 
Protein sequence
MLYQYSGADV TKTNLITGFL GSGKTTSILH LLAHKDPAEK WAVLVNEFGE VGIDGALLAD 
SGALLKEIPG GCMCCVNGLP MQVGLNTLLR QGKPDRLLIE PTGLGHPKQI LDLLTAPVYE
PWIDLRATLC ILDPRLLLDQ QSVANENFRD QLASADIIIA NKTDRATAQS DAALQQWWRQ
YGGDRQLIHA EHGQIDGKLL DLPRQNLAEL PASAAHSHTH TSKKGLAALN LPAQQRWRRS
LNSGQGHQAC GWIFDADTVF DTIGLLEWAR LAPVGRVKGV MRIQEGLVRI NRQGDDLHIE
TQSVAPPDSR VELISNTETD WNTLQTALLK LRLATHA