Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | SNSL254_A2401 |
Symbol | |
ID | 6482507 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Salmonella enterica subsp. enterica serovar Newport str. SL254 |
Kingdom | Bacteria |
Replicon accession | NC_011080 |
Strand | + |
Start bp | 2318947 |
End bp | 2320128 |
Gene Length | 1182 bp |
Protein Length | 393 aa |
Translation table | 11 |
GC content | 54% |
IMG OID | 642737740 |
Product | sugar efflux transporter B |
Protein accession | YP_002041482 |
Protein GI | 194446030 |
COG category | [G] Carbohydrate transport and metabolism |
COG ID | [COG2814] Arabinose efflux permease |
TIGRFAM ID | [TIGR00899] sugar efflux transporter |
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Plasmid Coverage information |
Num covering plasmid clones | 4 |
Plasmid unclonability p-value | 0.0487824 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 38 |
Fosmid unclonability p-value | 0.0000630797 |
Fosmid Hitchhiker | Yes |
Fosmid clonability | hitchhiker |
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Sequence |
Gene sequence | ATGCACAACA GTCCCGCCGC CGCTGCGCCT AAATCGTTTG ACCTGACGTC TACCGCCTTT TTGATCGTGG CTTTTCTCAC CGGTATTGCC GGTGCGTTAC AGACGCCGAC GCTCAGTATT TTTCTGACGG ATGAGGTTCA CGCCCGCCCC GGCATGGTGG GATTCTTTTT TACCGGCAGC GCGGTTATCG GCATTATCGT GAGCCAGTTT CTGGCCGGTC GCTCAGATAA AAAAGGCGAT CGCAAAAAAC TGATCGTTTT CTGTTGCGTG CTGGGCATGT TGGCCTGCGT GCTGTTTGCC TGGAACCGCA ACTACTTTAT TTTGCTGTTT ATCGGCGTCT TTCTCAGTAG CTTCGGCTCT ACCGCCAACC CGCAGATGTT TGCGCTCGCC CGTGAACATG CCGATCGTAC AGGTCGTGAA GCGGTGATGT TCAGCTCAAT CCTCCGCGCC CAGGTCTCAT TGGCCTGGGT CATTGGGCCG CCGCTGGCCT ATGCGCTGGC GATGGGTTTT AGCTTTACGG TGATGTATTT GAGCGCGGCG GTAGCTTTTA TCGTCTGCGG CGTCATGGTG TGGTTCTTTT TACCGTCAAT GCGCAAAGAT GCGCCGCTGG CAACCGGCAC GCTGGAAGCA CCGCGTCGTA ATCGCCGCGA TACGCTGTTG CTGTTTGTCA TCTGTACGTT AATGTGGGGA ACTAACAGCC TGTATATCAT TAATATGCCG CTGTTTATCA TCAATGAGCT GCATCTTCCG GAAAAACTTG CAGGCGTGAT GATGGGCACC GCCGCCGGGC TGGAGATTCC CACAATGCTG ATTGCAGGTT ACTTCGCCAA ACGGTTGGGA AAACGCCTGT TAATGTGCAT CGCCGTTGTC GCCGGACTGT GCTTTTATGC GGGGATGTTG CTGGCGCACG CGCCGGCAAC GTTACTCGGC TTGCAGTTGC TGAACGCGAT TTACATCGGC ATTCTTGGCG GGATTGGCAT GCTCTATTTT CAGGATCTCA TGCCAGGCCA GGCGGGTTCA GCCACCACGC TGTATACCAA TACCATTCGC GTCGGCTGGA TCATTGCCGG TTCGCTGGCG GGAATCGCCG CAGAAATCTG GAATTATCAT GCGGTCTTCT GGTTTGCGTT AGTCATGATT GTCGCCACCA TGTTCTGCCT GGCGCGTATT AAAGATGTTT AA
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Protein sequence | MHNSPAAAAP KSFDLTSTAF LIVAFLTGIA GALQTPTLSI FLTDEVHARP GMVGFFFTGS AVIGIIVSQF LAGRSDKKGD RKKLIVFCCV LGMLACVLFA WNRNYFILLF IGVFLSSFGS TANPQMFALA REHADRTGRE AVMFSSILRA QVSLAWVIGP PLAYALAMGF SFTVMYLSAA VAFIVCGVMV WFFLPSMRKD APLATGTLEA PRRNRRDTLL LFVICTLMWG TNSLYIINMP LFIINELHLP EKLAGVMMGT AAGLEIPTML IAGYFAKRLG KRLLMCIAVV AGLCFYAGML LAHAPATLLG LQLLNAIYIG ILGGIGMLYF QDLMPGQAGS ATTLYTNTIR VGWIIAGSLA GIAAEIWNYH AVFWFALVMI VATMFCLARI KDV
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