Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | SNSL254_A2389 |
Symbol | |
ID | 6483953 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Salmonella enterica subsp. enterica serovar Newport str. SL254 |
Kingdom | Bacteria |
Replicon accession | NC_011080 |
Strand | + |
Start bp | 2306410 |
End bp | 2307732 |
Gene Length | 1323 bp |
Protein Length | 440 aa |
Translation table | 11 |
GC content | 51% |
IMG OID | 642737728 |
Product | regulatory protein UhpC |
Protein accession | YP_002041470 |
Protein GI | 194443441 |
COG category | [G] Carbohydrate transport and metabolism |
COG ID | [COG2271] Sugar phosphate permease |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 9 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 60 |
Fosmid unclonability p-value | 0.365654 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAGTATAA AAACATTTAT TTTCAGCCAG CCCGATAAGC CGATTGTAAA AGAGAAAAAA GAGATAGACC AGACCTATAA AAAATTTCGT TTTGAGATTA TCGCCTCGGT CTTTATCTCT TATGCCGTCT TTTATCTTAC CCGTAAAAAC TTCTCCGCCG CGATGCCGGC CATGCTGACG GAAACGTCGC TGACCGCAGA AGACTTCGCC ATTATGTCTT CTATTTTTTA CATTCTTTAT GGCGCGATGA AGTTTGTCGG CGGGATGCTG GTCGATAAAA TTAACCCGAA AGCCATGACC GGCCCGGTGT TGATTGGCGT GGGGATTGTA AATATTCTGT TCGGCTTTTC CGATAGCGTG GCGGCATTCT ACGTACTGTA CAGCCTCAAC GCGATATTAC AGGGCACCAG CTTTCCGCCG ATGGCGAAAA TTATGGCCTC GTGGTTTTCG AAAAACGAAC GGGGACGCTG GTGGGCTATC GTTGAAGCGG CGCACAATAT CGGCGGCAGC CTCGCGCCAC TGCTGACCAG CTTTGCTATC GCCTTTAGCG GTAGCTGGAA AATGGGGTTT TATGTTCCCG GCGCCATTTC GCTGCTGATG GGGATAGTGG CGCTATTTAC CATTAAAGAT CGTCCCGGTA CGTTAGGTTT GCCCAACGTG GGGCAGTGGC GTAACGACCC GACGGAACTG GCCCAGGTCA AGGCCAGCCC GGTCAACCTG AGCTTCTGGC AGATTTTTGT GAAATATATC CTGACCAATC CACTGGTATG GATCATTATT ATCGGCGATA TGTCAGTTTA TATTGCGCGC ACTATTCTTA ACGACTGGCC GCAGATTTAC TATTCGCAGG TTCACGGCTG GAGTCTGATA AAAGCGAACT CGATTATTTC CTGGTTTGAG GCGGGCGGAC TGGCAGGTGG GTTGCTGGCA GGCTACTTGT CTGACTTTAT GTTCAAAAGT AACCGCTGGA TGACCGGATT AATCTTCGCG TTAGCGCTGT GCATATGCAT CGTGCTGGTG CCGCTGGTTC AGGATACCTC TTACACCCTC ACCGCGATTC TGTTCACCAT CATGGGCTTC GCCTTATACG GACCGCATAT GCTTTTTGCC GTCGGCTGTC TGGATGTGAC CCATAAGGAT GCGGCGGGAT CGATTACCGG CTTTCGGGGA TTGTTCAGCT ATGTCGGCGC GGCAATGGCC GGTGTGCCGG TAATTATGGT GAAAAATAGC TGGGCGTGGT CGGGCGTTTA TATCTATGCG GTGATCGCCA TTCTGCTAAC GACTCTGTCG CTGGCGCTGC TCTCCAGGCT GCATCGGTTA TAA
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Protein sequence | MSIKTFIFSQ PDKPIVKEKK EIDQTYKKFR FEIIASVFIS YAVFYLTRKN FSAAMPAMLT ETSLTAEDFA IMSSIFYILY GAMKFVGGML VDKINPKAMT GPVLIGVGIV NILFGFSDSV AAFYVLYSLN AILQGTSFPP MAKIMASWFS KNERGRWWAI VEAAHNIGGS LAPLLTSFAI AFSGSWKMGF YVPGAISLLM GIVALFTIKD RPGTLGLPNV GQWRNDPTEL AQVKASPVNL SFWQIFVKYI LTNPLVWIII IGDMSVYIAR TILNDWPQIY YSQVHGWSLI KANSIISWFE AGGLAGGLLA GYLSDFMFKS NRWMTGLIFA LALCICIVLV PLVQDTSYTL TAILFTIMGF ALYGPHMLFA VGCLDVTHKD AAGSITGFRG LFSYVGAAMA GVPVIMVKNS WAWSGVYIYA VIAILLTTLS LALLSRLHRL
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