Gene SNSL254_A2359 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSNSL254_A2359 
Symbol 
ID6484917 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSalmonella enterica subsp. enterica serovar Newport str. SL254 
KingdomBacteria 
Replicon accessionNC_011080 
Strand
Start bp2278609 
End bp2279178 
Gene Length570 bp 
Protein Length189 aa 
Translation table11 
GC content58% 
IMG OID642737699 
Productinner membrane protein YohD 
Protein accessionYP_002041441 
Protein GI194444304 
COG category[S] Function unknown 
COG ID[COG0586] Uncharacterized membrane-associated protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones10 
Plasmid unclonability p-value0.84239 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones74 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGATATCA ACACGCTTAT TACGCATTAT GGCTATGCGG CGCTGGTTAT CGGCAGTATG 
GCCGAAGGTG AAACCGTTAC CCTGTTGGGG GGCGTCGCGG CGCATCAGGG ATTACTCAAG
TTTCCGCTGG TGGCGGCGGC CGTCGCGCTG GGAGGGATGA TGGGCGATCA GCTACTTTAC
CTGTTAGGAC GATGCTATGG CGGGAAGATC CTGCGTCGTT TCCCGCGTTA TCATACGAAG
ATTCGTCGCG CGCAGAAAAT GATCCAACGC CATCCGTATC TGTTTGTGAT CGGCACGCGT
TTTATGTATG GCTTCCGGGT GGTTGGCCCG CTGCTGATTG GCGCCAGCCG CCTGCCGCCT
AAAATTTTTC TGCCGCTGAA TATTGTAGGC GCGCTGATCT GGGCGCTGCT GTTTACCACG
CTGGGATATC TTGGCGGCGA GGTGATCGCG CCATGGCTGC ACGACCTCGA TCAGCATCTC
AGGCACGGAG TCTGGCTGAT TCTGGCCATC GTCCTGGTGG TGGGCGTGCG CTGGTGGCTG
AAAAGACGCG GCAAAGCGGA GGCCCGTTAA
 
Protein sequence
MDINTLITHY GYAALVIGSM AEGETVTLLG GVAAHQGLLK FPLVAAAVAL GGMMGDQLLY 
LLGRCYGGKI LRRFPRYHTK IRRAQKMIQR HPYLFVIGTR FMYGFRVVGP LLIGASRLPP
KIFLPLNIVG ALIWALLFTT LGYLGGEVIA PWLHDLDQHL RHGVWLILAI VLVVGVRWWL
KRRGKAEAR