Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | SNSL254_A2273 |
Symbol | rfbG |
ID | 6485624 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Salmonella enterica subsp. enterica serovar Newport str. SL254 |
Kingdom | Bacteria |
Replicon accession | NC_011080 |
Strand | - |
Start bp | 2183705 |
End bp | 2184784 |
Gene Length | 1080 bp |
Protein Length | 359 aa |
Translation table | 11 |
GC content | 43% |
IMG OID | 642737620 |
Product | CDP-glucose 4,6-dehydratase |
Protein accession | YP_002041362 |
Protein GI | 194445789 |
COG category | [G] Carbohydrate transport and metabolism [M] Cell wall/membrane/envelope biogenesis |
COG ID | [COG0451] Nucleoside-diphosphate-sugar epimerases |
TIGRFAM ID | [TIGR02622] CDP-glucose 4,6-dehydratase |
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Plasmid Coverage information |
Num covering plasmid clones | 13 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 34 |
Fosmid unclonability p-value | 0.0000124958 |
Fosmid Hitchhiker | Yes |
Fosmid clonability | hitchhiker |
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Sequence |
Gene sequence | ATGATTGATA AAAATTTTTG GCAAGGTAAA CGTGTATTCG TTACCGGCCA TACTGGCTTT AAAGGAAGCT GGCTTTCGCT ATGGCTGACT GAAATGGGTG CAATTGTAAA AGGCTATGCA CTTGATGCGC CAACTGTTCC AAGTTTATTT GAGATAGTGC ATCTTAATGA TCTTATGGAA TCTCATATTG GCGATATTCG TGATTTTGAA AAGCTGCGCA ATTCTATTGC AGAATTTAAG CCAGAAATTG TTTTCCATAT GGCAGCCCAG CCTTTAGTGC GCCTATCTTA TGAACAGCCA ATCGAAACAT ACTCAACAAA TGTTATGGGT ACTGTCCATT TGCTTGAAGC AGTTAAGCAA GTAGGTAACA TAAAGGCAGT CGTAAATATC ACCAGTGATA AGTGCTACGA CAATCGTGAG TGGGTGTGGG GCTATCGTGA GAACGAACCC ATGGGAGGGT ACGATCCATA CTCTAATAGT AAAGGTTGTG CAGAATTAGT CGCGTCTGCA TTCCGGAACT CATTCTTCAA TCCTGCAAAT TATGAGCAAC ATGGCGTTGG TTTGGCGTCT GTGAGGGCTG GTAATGTCAT AGGCGGAGGC GATTGGGCTA AAGACCGTTT AATTCCCGAT ATTCTGCGCT CATTTGAAAA TAACCAGCAG GTTATTATTC GAAACCCATA TTCTATCCGT CCATGGCAGC ATGTACTGGA GCCTCTTTCT GGTTACATTG TGGTGGCGCA ACGCTTATAT ACAGAAGGTG CTAAGTTTTC TGAAGGATGG AATTTCGGCC CGCGTGATGA AGATGCGAAG ACGGTCGAAT TTATTGTTGA CAAGATGGTC ACGCTTTGGG GTGATGATGC AAGCTGGTTA CTGGATGGTG AGAATCATCC TCATGAGGCA CATTATCTGA AACTGGATTG CTCTAAAGCA AATATGCAAT TAGGATGGCA TCCGCGTTGG GGATTGACTG AAACACTTGG TCGCATCGTA AAATGGCATA AAGCATGGAT TCGCGGCGAA GATATGTTGA TTTGTTCAAA GCGTGAAATC AGCGACTATA TGTCTGCAAC TACTCGTTAA
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Protein sequence | MIDKNFWQGK RVFVTGHTGF KGSWLSLWLT EMGAIVKGYA LDAPTVPSLF EIVHLNDLME SHIGDIRDFE KLRNSIAEFK PEIVFHMAAQ PLVRLSYEQP IETYSTNVMG TVHLLEAVKQ VGNIKAVVNI TSDKCYDNRE WVWGYRENEP MGGYDPYSNS KGCAELVASA FRNSFFNPAN YEQHGVGLAS VRAGNVIGGG DWAKDRLIPD ILRSFENNQQ VIIRNPYSIR PWQHVLEPLS GYIVVAQRLY TEGAKFSEGW NFGPRDEDAK TVEFIVDKMV TLWGDDASWL LDGENHPHEA HYLKLDCSKA NMQLGWHPRW GLTETLGRIV KWHKAWIRGE DMLICSKREI SDYMSATTR
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