Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | SNSL254_A2247 |
Symbol | |
ID | 6484910 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Salmonella enterica subsp. enterica serovar Newport str. SL254 |
Kingdom | Bacteria |
Replicon accession | NC_011080 |
Strand | - |
Start bp | 2156174 |
End bp | 2157088 |
Gene Length | 915 bp |
Protein Length | 304 aa |
Translation table | 11 |
GC content | 53% |
IMG OID | 642737595 |
Product | LysR substrate binding domain protein |
Protein accession | YP_002041337 |
Protein GI | 194445500 |
COG category | [K] Transcription |
COG ID | [COG0583] Transcriptional regulator |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 6 |
Plasmid unclonability p-value | 0.160886 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 58 |
Fosmid unclonability p-value | 0.244849 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAAACCAC TGCTGGACGT TCTGATTATT CTTGATGCGT TAGAAAAAGA AGGCAGCTTC GCGGCGGCGT CGGCAAAATT ATTTAAAACG CCGTCCGCCC TCAGTTATAC CGTTCATAAG CTGGAAAACG ATCTTAATAT CCAACTGCTC GACCGTAGCG GGCATCGCGC GCGATTTACG CGAACCGGTA AGATGCTACT GGAAAAAGGC CGTGAAGTGC TGCACACCGT TCGCGAGCTG GAAAAGCAGG CGATTAAACT GCATGAAGGC TGGGAGAACG AACTGGTCAT CGGTGTGGAT GATACCTTTC CCTTTTCTCT TCTGGCCCCG CTTATCGACG CTTTTTATCA ACGCCACAGC GTGACGCGCC TTAAATTTGT CAATGGCGTT CTCGGCGGTT CATGGGAGAC GCTGACGCAG GGAAGGGCGG ATATTATTGT TGGCGCCATG CGCGCGCCGC CGCCTGACAC CGGCTTTGGC TTTGCAAGAC TGGGCGATCT TGAACTGGTG TTTGCTGTCG CTCCGCATCA TCCGCTGGTT CATGAAGAGG AACCGCTTAG CCGCCAGACG ATCAAACGTT TTCGCGCGAT TGTGGTTGGC GATAGCGTCC ATTCCTCGCG ATCAATAGGG TCTGAACTGC TCGACGCTCA GGAAGCGATT ACCGTGTTTG ATTTTAAAAC CAAGCTGGAG CTGCAAATTA GTGGCCTGGG ATGCGGCTAT TTACCGCGTT ATCTGGCGCA GCGATTTTTG GAAAGCGGCG CGCTTATAGA GAAGAAAGTT GTGGCGCAAA TCGTCTATGA ACCGGTGTGG GTTGGCTGGA ATGAACAGAC CGCCGGGCTG GCCAGCGGCT GGTGGCGGGA TGAAATTTTA GCAAATAATG CTATTGCTGG GGTGTATGCA AAATCGCCGG TTTAA
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Protein sequence | MKPLLDVLII LDALEKEGSF AAASAKLFKT PSALSYTVHK LENDLNIQLL DRSGHRARFT RTGKMLLEKG REVLHTVREL EKQAIKLHEG WENELVIGVD DTFPFSLLAP LIDAFYQRHS VTRLKFVNGV LGGSWETLTQ GRADIIVGAM RAPPPDTGFG FARLGDLELV FAVAPHHPLV HEEEPLSRQT IKRFRAIVVG DSVHSSRSIG SELLDAQEAI TVFDFKTKLE LQISGLGCGY LPRYLAQRFL ESGALIEKKV VAQIVYEPVW VGWNEQTAGL ASGWWRDEIL ANNAIAGVYA KSPV
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