Gene SNSL254_A2247 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSNSL254_A2247 
Symbol 
ID6484910 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSalmonella enterica subsp. enterica serovar Newport str. SL254 
KingdomBacteria 
Replicon accessionNC_011080 
Strand
Start bp2156174 
End bp2157088 
Gene Length915 bp 
Protein Length304 aa 
Translation table11 
GC content53% 
IMG OID642737595 
ProductLysR substrate binding domain protein 
Protein accessionYP_002041337 
Protein GI194445500 
COG category[K] Transcription 
COG ID[COG0583] Transcriptional regulator 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.160886 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones58 
Fosmid unclonability p-value0.244849 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAAACCAC TGCTGGACGT TCTGATTATT CTTGATGCGT TAGAAAAAGA AGGCAGCTTC 
GCGGCGGCGT CGGCAAAATT ATTTAAAACG CCGTCCGCCC TCAGTTATAC CGTTCATAAG
CTGGAAAACG ATCTTAATAT CCAACTGCTC GACCGTAGCG GGCATCGCGC GCGATTTACG
CGAACCGGTA AGATGCTACT GGAAAAAGGC CGTGAAGTGC TGCACACCGT TCGCGAGCTG
GAAAAGCAGG CGATTAAACT GCATGAAGGC TGGGAGAACG AACTGGTCAT CGGTGTGGAT
GATACCTTTC CCTTTTCTCT TCTGGCCCCG CTTATCGACG CTTTTTATCA ACGCCACAGC
GTGACGCGCC TTAAATTTGT CAATGGCGTT CTCGGCGGTT CATGGGAGAC GCTGACGCAG
GGAAGGGCGG ATATTATTGT TGGCGCCATG CGCGCGCCGC CGCCTGACAC CGGCTTTGGC
TTTGCAAGAC TGGGCGATCT TGAACTGGTG TTTGCTGTCG CTCCGCATCA TCCGCTGGTT
CATGAAGAGG AACCGCTTAG CCGCCAGACG ATCAAACGTT TTCGCGCGAT TGTGGTTGGC
GATAGCGTCC ATTCCTCGCG ATCAATAGGG TCTGAACTGC TCGACGCTCA GGAAGCGATT
ACCGTGTTTG ATTTTAAAAC CAAGCTGGAG CTGCAAATTA GTGGCCTGGG ATGCGGCTAT
TTACCGCGTT ATCTGGCGCA GCGATTTTTG GAAAGCGGCG CGCTTATAGA GAAGAAAGTT
GTGGCGCAAA TCGTCTATGA ACCGGTGTGG GTTGGCTGGA ATGAACAGAC CGCCGGGCTG
GCCAGCGGCT GGTGGCGGGA TGAAATTTTA GCAAATAATG CTATTGCTGG GGTGTATGCA
AAATCGCCGG TTTAA
 
Protein sequence
MKPLLDVLII LDALEKEGSF AAASAKLFKT PSALSYTVHK LENDLNIQLL DRSGHRARFT 
RTGKMLLEKG REVLHTVREL EKQAIKLHEG WENELVIGVD DTFPFSLLAP LIDAFYQRHS
VTRLKFVNGV LGGSWETLTQ GRADIIVGAM RAPPPDTGFG FARLGDLELV FAVAPHHPLV
HEEEPLSRQT IKRFRAIVVG DSVHSSRSIG SELLDAQEAI TVFDFKTKLE LQISGLGCGY
LPRYLAQRFL ESGALIEKKV VAQIVYEPVW VGWNEQTAGL ASGWWRDEIL ANNAIAGVYA
KSPV