| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | SNSL254_A2193 |
|---|
| Symbol | cobS |
|---|
| ID | 6485106 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Salmonella enterica subsp. enterica serovar Newport str. SL254 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_011080 |
|---|
| Strand | - |
|---|
| Start bp | 2107075 |
|---|
| End bp | 2107818 |
|---|
| Gene Length | 744 bp |
|---|
| Protein Length | 247 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 56% |
|---|
| IMG OID | 642737542 |
|---|
| Product | cobalamin synthase |
|---|
| Protein accession | YP_002041284 |
|---|
| Protein GI | 194444255 |
|---|
| COG category | [H] Coenzyme transport and metabolism |
|---|
| COG ID | [COG0368] Cobalamin-5-phosphate synthase |
|---|
| TIGRFAM ID | [TIGR00317] cobalamin 5'-phosphate synthase/cobalamin synthase |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 13 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 78 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGAGTAAGC TGTTTTGGGC CATGCTCGCT TTTATTAGCC GCTTGCCCGT GCCGTCACGC
TGGTCGCAGG GACTGGATTT CGAGCAGTAT TCGCGTGGGA TCGTGATGTT TCCCTTTATC
GGGTTGATTC TGGGAGGGGT AAGCGGCCTG ATTTTCATCC TCCTGCAACC CTGGTGCGGT
ATTCCGCTAG CGGCGTTGTT CTGTATTCTG GCGCTGGCGT TGCTGACCGG TGGTTTTCAC
CTGGATGGGT TGGCCGATAC CTGCGATGGT ATTTTTTCCG CGCGCCGCCG TGAGCGAATG
CTGGAGATTA TGCGTGATAG TCGTCTGGGA ACCCATGGCG GGCTGGCGCT TATTTTTGTG
CTACTGGCAA AAATTCTGGT GGTCAGCGAA CTGGCGTTAC GTGGAACGCC AATGTTGGCG
GCGTTGGCGG CGGCCTGTGC GGCCGGACGC GGCAGCGCCG TTTTATTGAT GTACCGTCAT
CGCTACGCCC GTGAAGAGGG GCTTGGCAAT GTATTTATCG GTAAAGTCAG CGGACGGCAA
ACCTGCATTA CTCTGGGATT GGCGATAATC ATCGCCACGG TATTACTGCC TGGTATGCAA
GGACTGGCCG CAATGGTGGT CACATGCGCG GCGATTTTCA TCCTTGGCCA GTTGCTTAAA
CGTACGCTTG GCGGTCAAAC CGGCGATACG CTGGGCGCGG CGATCGAACT TGGCGAATTG
ATCTTTCTGC TGGCTCTGTT ATGA
|
|---|
| Protein sequence | MSKLFWAMLA FISRLPVPSR WSQGLDFEQY SRGIVMFPFI GLILGGVSGL IFILLQPWCG
IPLAALFCIL ALALLTGGFH LDGLADTCDG IFSARRRERM LEIMRDSRLG THGGLALIFV
LLAKILVVSE LALRGTPMLA ALAAACAAGR GSAVLLMYRH RYAREEGLGN VFIGKVSGRQ
TCITLGLAII IATVLLPGMQ GLAAMVVTCA AIFILGQLLK RTLGGQTGDT LGAAIELGEL
IFLLALL
|
|---|
| |