Gene SNSL254_A2166 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSNSL254_A2166 
Symbol 
ID6487009 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSalmonella enterica subsp. enterica serovar Newport str. SL254 
KingdomBacteria 
Replicon accessionNC_011080 
Strand
Start bp2086602 
End bp2087399 
Gene Length798 bp 
Protein Length265 aa 
Translation table11 
GC content51% 
IMG OID642737519 
Producthypothetical protein 
Protein accessionYP_002041265 
Protein GI194444915 
COG category[S] Function unknown 
COG ID[COG3228] Uncharacterized protein conserved in bacteria 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.000309216 
Plasmid hitchhikingYes 
Plasmid clonabilityhitchhiker 
 

Fosmid Coverage information

Num covering fosmid clones60 
Fosmid unclonability p-value0.207813 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGATTAAGT GGCCCTGGAA AGCACAAGAA ATAACCCAGA ACGAAGACTG GCCGTGGGAT 
GATGCGCTGG CTATACCTCT TCTGGTAAAC CTCACCGCGC AAGAACAGGC TCGGCTTATT
GCGCTAGCCG AACGTTTTTT GCAGCAGAAA AGACTGGTAG CGCTACAGGG ATTTGAGCTC
GACTCGTTAA AAAGTGCACG TATTGCGTTA ATTTTTTGCT TACCGATCCT GGAGCTCGGT
ATTGAGTGGC TTGATGGTTT TCATGAAGTG CTCATTTATC CCGCGCCCTT TGTGGTAGAT
GATGAATGGG AAGATGACAT AGGTCTGGTG CACAGCCAGC GTGTCGTACA GTCGGGGCAA
AGCTGGCAAC AAGGGCCCAT CATTCTGAAC TGGCTGGATA TCCAGGACTC GTTCGATGCT
TCGGGTTTCA ACCTCATTAT TCATGAAGTC GCGCACAAAC TGGATATGCG TAATGGCGAT
CGCGCCAGCG GCATCCCTTT CATCCCGTTG CGCGATGTGG CTGGCTGGGA ACACGATCTC
CACGCGGCAA TGAATAATAT TCAGGATGAA ATCGATCTTG TTGGCGAAAG CGCTGCCAGT
ATAGATGCCT ATGCCGCCAC CGACCCTGCA GAATGTTTTG CCGTGTTGTC AGAGTATTTT
TTCAGCGCGC CAGAACTGTT TGCTCCACGT TTCCCGGCGC TATGGCAGCG TTTTTGCCAG
TTCTATCGCC AGGATCCTTC TCAGCGCTTA CGGGTAAGCG CTGACGAAGG CGACTACGGC
GAGGAATCCG AACATTAA
 
Protein sequence
MIKWPWKAQE ITQNEDWPWD DALAIPLLVN LTAQEQARLI ALAERFLQQK RLVALQGFEL 
DSLKSARIAL IFCLPILELG IEWLDGFHEV LIYPAPFVVD DEWEDDIGLV HSQRVVQSGQ
SWQQGPIILN WLDIQDSFDA SGFNLIIHEV AHKLDMRNGD RASGIPFIPL RDVAGWEHDL
HAAMNNIQDE IDLVGESAAS IDAYAATDPA ECFAVLSEYF FSAPELFAPR FPALWQRFCQ
FYRQDPSQRL RVSADEGDYG EESEH