| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | SNSL254_A2155 |
|---|
| Symbol | |
|---|
| ID | 6485090 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Salmonella enterica subsp. enterica serovar Newport str. SL254 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_011080 |
|---|
| Strand | - |
|---|
| Start bp | 2078583 |
|---|
| End bp | 2080013 |
|---|
| Gene Length | 1431 bp |
|---|
| Protein Length | 476 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 54% |
|---|
| IMG OID | 642737509 |
|---|
| Product | DNA cytosine methylase |
|---|
| Protein accession | YP_002041256 |
|---|
| Protein GI | 194443436 |
|---|
| COG category | [L] Replication, recombination and repair |
|---|
| COG ID | [COG0270] Site-specific DNA methylase |
|---|
| TIGRFAM ID | [TIGR00675] DNA-methyltransferase (dcm) |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 10 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 53 |
|---|
| Fosmid unclonability p-value | 0.0409475 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGCAGGAAA ATATTTCAGT AACACACGCC CGGAACCTCA TCGCCGACGA CGCCGGAAGC
GAGATCCAGG CGATGCTGAG TCAATTGCTG GAAATCTACG ATGTTAAAAC GCTGGTGGCG
CACCTTAACG GCCTGGGCGA ACAGCACTGG AGCCCGGCCA TCTTAAAGCG CGTAATGATG
AACGCGGCAT GGCATCGTTT GAGCGACAAT GAACTCACCT GTCTTAAAAC AGGGTTGCCG
ACGCCGCCAG CGCATCATCC ACATTACGCC TTTCGTTTTA TCGATCTCTT CGCGGGCATC
GGCGGCATTC GCCGCGGATT TGAAGCGATA GGCGGACAGT GCGTGTTTAC CAGCGAATGG
AATAAGCACG CGGTACGGAC ATATAAAGCG AACTATTTTT GCGATCCGCT GCAACATCGC
TTTAATGAAG ATATCCGCGA TATCACGTTG AGCCACCGGG AAGGGGTCAG CGATGATGAG
GCGGCGGAAC ACATTCGCCA GCATATTCCG CAACATGATG TCCTGCTGGC GGGCTTTCCC
TGTCAGCCAT TTTCTCTGGC GGGCGTTTCC AAGAAAAATG CGCTGGGCCG CGCCCACGGC
TTTGCCTGCG AGACTCAGGG GACATTATTT TTTGATGTCG TAAGAATTAT CGACGCCCGC
CGCCCCGCGC TGTTTGTGCT GGAAAACGTG AAAAACCTTA AAAGTCACGA CCAGGGCAAC
ACCTTCCGCA TTATTATGCA AACGCTCGAT GAACTGGGAT ATGACGTGGC GGATGCCGCT
GACAATGGCC CGGACGATCC GAAAATTATC GACGGGCAGC ACTTTCTTCC TCAGCATCGG
GAACGTATTG TGTTGGTGGG ATTCCGTCGC GATTTAAACC TGAAAACCGA TTTTACGTTA
CGCAATATCG CCCGTTGTTA TCCACCGCGC CGTCCGACGC TGGCAGAACT GCTGGAGCCC
GTCGTCGAAG CCAAATATAT CCTGACGCCG GTGCTGTGGA AATATTTATA TCGCTACGCG
AAAAAGCACC AGGCGCGGGG AAACGGTTTT GGCTATGGCA TGGTTTATCC TGACAATCCG
GAAAGTGTGG CGCGCACGTT ATCTGCTCGC TACTACAAAG ATGGCGCCGA AATTCTGATC
GATCGTGGTT GGGATATGGC GAAAGGCGAA GTGAATTTCG ACGATGCTGG CAACCAACAA
CATCGTCCCC GCCGACTCAC GCCGAGAGAG TGCGCGCGTT TAATGGGATT TGAGGCGCCG
CAAACGTACC AGTTCAGGAT ACCTGTCTCG GATACGCAGG CCTATCGCCA GTTTGGCAAC
TCCGTGGTGG TGCCGGTATT TGCTGCGGTA GCAAAGCTGC TGGAACCCAA AATTCACCAG
GCGGTGACGC TGCGTCAGAA AGAGACGGTA GATGGCGGAC GTTCACGATA A
|
|---|
| Protein sequence | MQENISVTHA RNLIADDAGS EIQAMLSQLL EIYDVKTLVA HLNGLGEQHW SPAILKRVMM
NAAWHRLSDN ELTCLKTGLP TPPAHHPHYA FRFIDLFAGI GGIRRGFEAI GGQCVFTSEW
NKHAVRTYKA NYFCDPLQHR FNEDIRDITL SHREGVSDDE AAEHIRQHIP QHDVLLAGFP
CQPFSLAGVS KKNALGRAHG FACETQGTLF FDVVRIIDAR RPALFVLENV KNLKSHDQGN
TFRIIMQTLD ELGYDVADAA DNGPDDPKII DGQHFLPQHR ERIVLVGFRR DLNLKTDFTL
RNIARCYPPR RPTLAELLEP VVEAKYILTP VLWKYLYRYA KKHQARGNGF GYGMVYPDNP
ESVARTLSAR YYKDGAEILI DRGWDMAKGE VNFDDAGNQQ HRPRRLTPRE CARLMGFEAP
QTYQFRIPVS DTQAYRQFGN SVVVPVFAAV AKLLEPKIHQ AVTLRQKETV DGGRSR
|
|---|
| |