Gene SNSL254_A2116 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSNSL254_A2116 
SymbolfliY 
ID6485942 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSalmonella enterica subsp. enterica serovar Newport str. SL254 
KingdomBacteria 
Replicon accessionNC_011080 
Strand
Start bp2048140 
End bp2048940 
Gene Length801 bp 
Protein Length266 aa 
Translation table11 
GC content52% 
IMG OID642737472 
Productcystine transporter subunit 
Protein accessionYP_002041219 
Protein GI194444067 
COG category[E] Amino acid transport and metabolism
[T] Signal transduction mechanisms 
COG ID[COG0834] ABC-type amino acid transport/signal transduction systems, periplasmic component/domain 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones15 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones21 
Fosmid unclonability p-value0.0000000000583389 
Fosmid HitchhikerYes 
Fosmid clonabilityhitchhiker 
 

Sequence

Gene sequence
ATGAAATTAG CACTGCTGGG ACGTCAGGCA CTGATGGGAG TAATGGCTGT AGCGCTGGTG 
GCGGGAATGA GCGCGAAGAG CTTTGCCGAT GAGGGTTTGC TGAACAAAGT TAAAGAACGC
GGCACGCTGC TGGTAGGGCT GGAAGGTACC TATCCGCCGT TTAGCTTTCA GGGCGACGAC
GGCAAATTAA CCGGTTTTGA AGTCGATTTC GCCGAGGCGT TGGCAAAACA TCTGGGCGTT
AAAGCGTCGT TGAAGCCGAC CAAATGGGAC GGAATGCTGG CGTCACTGGA CTCTAAACGC
ATTGATGTGG TGATAAACCA GGTCACGATT TCAGACGTCC GCAAGAAAAA ATATGACTTC
TCTACGCCTT ATACTGTCTC CGGCGTTCAG GCGCTGGTGA AAAAAGGCAA TGAAGGCACG
ATCAAAACGG CTGCCGATCT GCAGGGCAAA AAAGTCGGCG TTGGGCTGGG GACTAACTAT
GAAGAGTGGC TACGTCAACA TGTGCAGGGC GTGGATATCC GTACCTATGA CGATGATCCT
ACAAAATACC AGGATCTGCG CGTAGGCCGT ATTGACGCGA TTTTAGTCGA TCGTCTGGCG
GCGCTGGATC TGGTGAAAAA AACCAAAGGT ACGCTGGCCG TCACCGGTGA TGCGTTTTCG
CGTCAGGAGT CCGGCGTTGC GTTACGTAAA GGCAACGAAG ACTTGCTGAA GGCGGTAGAT
AACGCCATTG CGGAAATGCA AAAAGATGGC ACCTTAAAAG CGCTCTCTGA AAAATGGTTT
GGCGCTGACG TGACCCAATA A
 
Protein sequence
MKLALLGRQA LMGVMAVALV AGMSAKSFAD EGLLNKVKER GTLLVGLEGT YPPFSFQGDD 
GKLTGFEVDF AEALAKHLGV KASLKPTKWD GMLASLDSKR IDVVINQVTI SDVRKKKYDF
STPYTVSGVQ ALVKKGNEGT IKTAADLQGK KVGVGLGTNY EEWLRQHVQG VDIRTYDDDP
TKYQDLRVGR IDAILVDRLA ALDLVKKTKG TLAVTGDAFS RQESGVALRK GNEDLLKAVD
NAIAEMQKDG TLKALSEKWF GADVTQ