Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | SNSL254_A2091 |
Symbol | |
ID | 6485822 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Salmonella enterica subsp. enterica serovar Newport str. SL254 |
Kingdom | Bacteria |
Replicon accession | NC_011080 |
Strand | - |
Start bp | 2031081 |
End bp | 2031623 |
Gene Length | 543 bp |
Protein Length | 180 aa |
Translation table | 11 |
GC content | 55% |
IMG OID | 642737447 |
Product | ThiJ/PfpI domain protein |
Protein accession | YP_002041197 |
Protein GI | 194445362 |
COG category | [R] General function prediction only |
COG ID | [COG0693] Putative intracellular protease/amidase |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 10 |
Plasmid unclonability p-value | 0.616699 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 6 |
Fosmid unclonability p-value | 3.51942e-22 |
Fosmid Hitchhiker | Yes |
Fosmid clonability | hitchhiker |
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Sequence |
Gene sequence | GTGCTGTTGG CGCCAGGATT TGAAGAAGCA GAGGCCATTG TTACTCTTGA TATTCTGCGA CGTTTGCATA TCGACGTCGA AACGCTGGCG TGTGCTGAAT CACGGGCGGT GGTGAGTTAC CATGATATTC CTATGGTTGC GGACAGCACG CTGAGTGAAC GCCAGCAGGC GCTTTTTGAT GCGGTAGTGC TGCCGGGCGG TCCGCAGGGG AGCGCTAATC TGGCGGCTAA TCCGGCGGTG ATCGCTTTCG TTGCGCGTCA TGATGCGGCA GGCAAATTTA TTTGTCCTAT CTGTTCCGCG GCGGCAAGGG TGCTGGGTGC TCACGGATTG CTGAAGGGGC GTCGTTATGT CTGTTCCGGC GACCTGTGGA AAGCGGTTCC GGAAGGTGTC TATGTGGATG CGCCCGTTGT TGAAGATGGT AATTTAATTA GCGGCAAAGG CTTGGGTCAT GTCTTTGATT TCGCGCTAAC CCTTTCCGCC AGACTGCTGG GAGACGATGC GCCGGTTCGC GAACAGGCTG AACATATCTA TTATCCCTGG TAA
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Protein sequence | MLLAPGFEEA EAIVTLDILR RLHIDVETLA CAESRAVVSY HDIPMVADST LSERQQALFD AVVLPGGPQG SANLAANPAV IAFVARHDAA GKFICPICSA AARVLGAHGL LKGRRYVCSG DLWKAVPEGV YVDAPVVEDG NLISGKGLGH VFDFALTLSA RLLGDDAPVR EQAEHIYYPW
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