| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | SNSL254_A2090 |
|---|
| Symbol | otsB |
|---|
| ID | 6486346 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Salmonella enterica subsp. enterica serovar Newport str. SL254 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_011080 |
|---|
| Strand | - |
|---|
| Start bp | 2029645 |
|---|
| End bp | 2030448 |
|---|
| Gene Length | 804 bp |
|---|
| Protein Length | 267 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 54% |
|---|
| IMG OID | 642737446 |
|---|
| Product | trehalose-6-phosphate phosphatase |
|---|
| Protein accession | YP_002041196 |
|---|
| Protein GI | 194445765 |
|---|
| COG category | [G] Carbohydrate transport and metabolism |
|---|
| COG ID | [COG1877] Trehalose-6-phosphatase |
|---|
| TIGRFAM ID | [TIGR00685] trehalose-phosphatase
[TIGR01484] HAD-superfamily hydrolase, subfamily IIB |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 9 |
|---|
| Plasmid unclonability p-value | 0.591439 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 5 |
|---|
| Fosmid unclonability p-value | 4.88107e-23 |
|---|
| Fosmid Hitchhiker | Yes |
|---|
| Fosmid clonability | hitchhiker |
|---|
| |
Sequence |
| Gene sequence | GTGGCAGAAC CGTTAACCGT ATCCCCCGAA CCCACTGCGA ACTATGCGTA TTTTTTTGAC
CTTGATGGCA CATTGGCAGA GATAAAGCCT CATCCCGATC AGGTAGTGGT ACCGCATAAA
ATCCTTCAGT TGTTAGACCG TCTCGCGGCG CACAACGCAG GGGCACTGGC ATTGATTTCA
GGGCGTTCAA TGACTGAGCT GGATGCTTTG GCGAAGCCTT TTCGCTTTCC GCTCGCTGGC
GTTCATGGGG CAGAGCGTCG TGACATCAAT GGTAAAACCC ATATCGTGCG CCTTCCTGAA
GCGGTAGTCC GTGAAGTGGA GGCGTTATTA CGTTCGACGC TTGTAGCGCT GCCCGGAACG
GAGCTGGAGA CGAAGGGTAT GGCGTTTGCG CTGCACTACC GTCAGGCTCC GGAACATGAA
GCGGCGCTGT TGGCGCTTGC GCAACACGTT ACGCAGCACT GGCCGCAACT GGCGTTGCAG
CCTGGTAAAT GTGTTGTGGA AATCAAACCT AAGGGAACCA ATAAAGGCGA AGCCATTGCC
GCCTTTATGC AGGAGGCGCC CTTTGCGGGA CGGATTCCCG TTTTTGTGGG CGACGATTTG
ACCGATGAGG CTGGCTTTGG CGTGGTGAAT CACGCTGGCG GAATATCCGT AAAAGTGGGC
GTCGGAGCAA CCCAGGCGGC ATGGCGGCTG GAAAGCGTAC CCGATGTCTG GCGCTGGCTG
GAACAAATCA ATTATCCACA ACAAGAACAA CAAGTAATGA ATAACAGGAG AGATGGCTAT
GAGTCGTTTA GTCGTAGTAT CTAA
|
|---|
| Protein sequence | MAEPLTVSPE PTANYAYFFD LDGTLAEIKP HPDQVVVPHK ILQLLDRLAA HNAGALALIS
GRSMTELDAL AKPFRFPLAG VHGAERRDIN GKTHIVRLPE AVVREVEALL RSTLVALPGT
ELETKGMAFA LHYRQAPEHE AALLALAQHV TQHWPQLALQ PGKCVVEIKP KGTNKGEAIA
AFMQEAPFAG RIPVFVGDDL TDEAGFGVVN HAGGISVKVG VGATQAAWRL ESVPDVWRWL
EQINYPQQEQ QVMNNRRDGY ESFSRSI
|
|---|
| |