| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | SNSL254_A2089 |
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| Symbol | otsA |
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| ID | 6482798 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Salmonella enterica subsp. enterica serovar Newport str. SL254 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011080 |
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| Strand | - |
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| Start bp | 2028249 |
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| End bp | 2029670 |
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| Gene Length | 1422 bp |
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| Protein Length | 473 aa |
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| Translation table | 11 |
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| GC content | 53% |
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| IMG OID | 642737445 |
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| Product | trehalose-6-phosphate synthase |
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| Protein accession | YP_002041195 |
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| Protein GI | 194446277 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG0380] Trehalose-6-phosphate synthase |
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| TIGRFAM ID | [TIGR02400] alpha,alpha-trehalose-phosphate synthase [UDP-forming] |
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Plasmid Coverage information |
| Num covering plasmid clones | 5 |
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| Plasmid unclonability p-value | 0.148883 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 3 |
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| Fosmid unclonability p-value | 5.88528e-25 |
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| Fosmid Hitchhiker | Yes |
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| Fosmid clonability | hitchhiker |
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Sequence |
| Gene sequence | ATGAGTCGTT TAGTCGTAGT ATCTAATCGA ATTGCCCCCC CGGATAATAA AGGCGGCGCC
GGCGGCCTCG CCGTTGGCGT GCTTGGCGCG CTAAAAGCGG CTGGCGGGTT GTGGTTCGGC
TGGAGTGGCG AGACAGGTAA CGAGGATGAG CCATTAAAAA AGGTGACAAA AGGTAATATT
ACCTGGGCAT CGTTTAACCT GAGTGAACAA GATTACGAAG ATTATTACTG TCAATTTTCC
AATGCGGTTC TCTGGCCAGC GTTCCACTAT CGTCTGGACC TGGTACAGTT TCAGCGCCCT
GCATGGGAAG GCTATATGCG GGTGAATGCG CTATTAGCGG ATAAGTTATT GCCCCTCATT
AAAGAGAACG ACATCATTTG GGTGCATGAC TACCACCTGT TACCGTTCGC CAGCGAGCTG
CGTAAACGCG GCGTGAACAA CCGAATTGGT TTTTTCCTGC ATATTCCATT CCCGACCCCG
GAGATTTTTA ACGCTTTACC GCCGCATGAT GAACTGCTGG AGCAGTTGTG TGACTTTGAT
CTGCTCGGGT TCCAGACCGA AAATGATCGC CTGGCTTTTC TGGATAGCCT TTCGAGTCAA
ACGCGAGTCA CGACTCGCAG CGGCAAGCAG CATATCGCGT GGGGTAAAGA CTTCCAGACA
GAAGTGTATC CTATCGGTAT TGAGCCCGAT GAGATTGCTC TGCAGGCTGC CGGGCCGTTG
CCGCCTAAAC TGGCGCAGCT CAAGGCGGAA CTGAAAAATG TGAAGAATAT TTTTTCCGTT
GAGCGGCTGG ATTATTCGAA AGGGCTGCCG GAACGTTTTC TGGCGTATGA AGCGCTACTG
GAAAACTATC CGCAGCATCG GGGAAAAATT CGTTATACCC AAATTGCGCC TACGTCACGC
GGCGAAGTAC AGGCATATCA GGATATTCGC CACCAGCTTG AGACGGAAGC AGGCCGGATT
AATGGGAAAT ATGGACAATT GGGCTGGACG CCGCTCTATT ATCTGAATCA GCATTTCGAC
CGTAAACTGT TAATGAAGAT ATTCCGTTAT TCAGACGTCG GGCTCGTCAC CCCGTTGCGT
GACGGGATGA ACCTGGTGGC GAAAGAGTTT GTCGCCGCGC AGGACCCCGC TAATCCTGGC
GTACTGGTAC TGTCACAGTT TGCCGGCGCG GCGAATGAAC TGACGTCGGC GTTAATCGTC
AATCCTTACG ATCGGGATGA CGTGGCGGCG GCGCTCAATC GTGCGTTAAC GATGCCCCTT
GCCGAGCGTA TTTCGCGCCA TGCGGAAATG CTGGACGCGA TCGTTAAAAA TGACATTAAC
CGCTGGCAGG AACGTTTTAT TCATGACCTA AAGGAGGTCA CGCCGCGTAG CCCTGAGCGT
CAGCAGCAGA ACAACGTGGC GACGTTCCCT AAGCTGGCCT GA
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| Protein sequence | MSRLVVVSNR IAPPDNKGGA GGLAVGVLGA LKAAGGLWFG WSGETGNEDE PLKKVTKGNI
TWASFNLSEQ DYEDYYCQFS NAVLWPAFHY RLDLVQFQRP AWEGYMRVNA LLADKLLPLI
KENDIIWVHD YHLLPFASEL RKRGVNNRIG FFLHIPFPTP EIFNALPPHD ELLEQLCDFD
LLGFQTENDR LAFLDSLSSQ TRVTTRSGKQ HIAWGKDFQT EVYPIGIEPD EIALQAAGPL
PPKLAQLKAE LKNVKNIFSV ERLDYSKGLP ERFLAYEALL ENYPQHRGKI RYTQIAPTSR
GEVQAYQDIR HQLETEAGRI NGKYGQLGWT PLYYLNQHFD RKLLMKIFRY SDVGLVTPLR
DGMNLVAKEF VAAQDPANPG VLVLSQFAGA ANELTSALIV NPYDRDDVAA ALNRALTMPL
AERISRHAEM LDAIVKNDIN RWQERFIHDL KEVTPRSPER QQQNNVATFP KLA
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