Gene SNSL254_A1958 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSNSL254_A1958 
Symbol 
ID6486963 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSalmonella enterica subsp. enterica serovar Newport str. SL254 
KingdomBacteria 
Replicon accessionNC_011080 
Strand
Start bp1913587 
End bp1915272 
Gene Length1686 bp 
Protein Length561 aa 
Translation table11 
GC content52% 
IMG OID642737325 
Productlong-chain-fatty-acid--CoA ligase 
Protein accessionYP_002041075 
Protein GI194444947 
COG category[I] Lipid transport and metabolism
[Q] Secondary metabolites biosynthesis, transport and catabolism 
COG ID[COG0318] Acyl-CoA synthetases (AMP-forming)/AMP-acid ligases II 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.0509331 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones92 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
TTGAAGAAGG TTTGGCTTAA CCGTTATCCT GCTGATGTTC CGGCGGAGAT CAACCCTGAC 
CGTTATCAAT CCCTGGTTGA ACTGTTTGAA CATGCGGCGA CGCGCTATGC CGATCAGCCT
GCGTTCGTCA ATATGGGGGA GGTAATGACC TTCCGTAAAT TAGAAGAACG TAGTCGGGCA
TTTGCGGCTT ATTTACAACA AGGGCTGGGA CTCAAAAAAG GCGACCGTGT GGCGCTGATG
ATGCCAAACC TGTTGCAGTA TCCTGTCGCG CTATTTGGTA TTTTACGCGC CGGCATGATT
GTGGTGAACG TTAACCCGCT TTACACGCCG CGCGAACTTG AGCATCAGCT TAACGATAGC
GGCGCGGCGG CAATCATTAT TGTTTCTAAC TTTGCCCATA CGCTGGAAAA AGTGGTCGAG
AAAACGTCGG TACAGCACGT TATTCTGACG CGGATGGGCG ACCAGCTTTC TACCGCCAAA
GGTACGGTTG TTAACTTTGT CGTGAAATAC ATCAAGCGTC TGGTGCCAAA ATACCACTTG
CCAGATGCGA TCTCGTTTCG CAGCGCGCTA CAGCATGGCT ACCGTATGCA GTATGTCAAA
CCCGAGGTTG TCGCTGAAGA TCTGGCTTTC CTGCAATATA CTGGCGGTAC GACGGGCGTG
GCGAAAGGCG CGATGTTGAC CCACCGCAAT ATGCTGGCGA ATCTGGAGCA GGTGAAAGCG
ACCTATGGGC CGCTGCTGCA CCCGGGGAAA GAGCTGGTAG TGACCGCGCT GCCGCTGTAT
CACATTTTTG CCTTAACCAT GAACTGTCTG CTTTTTATCG AGCTGGGTGG GCAAAACCTG
CTGATTACCA ATCCGCGTGA TATCCCCGGC CTGGTCAAGG AGCTGGCGAA ATATCCATTT
ACGGCGATGA CTGGCGTTAA TACGCTATTC AACGCCCTGC TCAATAATAA AGAGTTTCAA
CAGCTGGATT TTTCTTCGCT GCATCTGTCA GCCGGCGGCG GGATGCCGGT GCAAAACGTC
GTTGCGGAAC GTTGGGTAAA GCTGACCGGG CAATACCTGC TGGAAGGCTA CGGGCTGACC
GAGTGCGCCC CGCTGGTGAG CGTCAACCCG CATGATATTG ATTATCACAG CGGCAGTATC
GGCCTGCCAG TACCGTCAAC AGAAGCCAAA CTGGTGGATG ACGATGACAA CGAAGTCGCG
CCGGGTGAGG CCGGAGAGCT TTGCGTGAAA GGCCCGCAGG TTATGCTGGG ATACTGGCAG
CGTCCTGACG CGACGGATGA AATCATTAAA GATGGCTGGC TGCATACGGG CGATATTGCG
GTTATGGATG AAGACGGCTT TCTGCGGATT GTCGATCGTA AGAAAGATAT GATTCTGGTT
TCTGGTTTCA ACGTTTATCC AAACGAAATT GAAGATGTGG TGATGCAGCA TTCTGGCGTG
CAGGAAGTCG CGGCGGTTGG CGTGCCTTCC GGTAGTAGCG GCGAAGCGGT GAAGCTTTTT
GTGGTTAAGA AAGATCCGGC ATTGACTGAC GATGCGTTGA TCACCTTCTG CCGTCGCCAT
CTGACCGGAT ATAAGGTGCC CAAACAGGTC GAGTTTCGCG AGGAATTACC AAAATCTAAC
GTTGGGAAAA TTTTACGACG AGAACTGCGT GACGAAGCCC GTGGCAAAGT AGACAATAAA
GCCTGA
 
Protein sequence
MKKVWLNRYP ADVPAEINPD RYQSLVELFE HAATRYADQP AFVNMGEVMT FRKLEERSRA 
FAAYLQQGLG LKKGDRVALM MPNLLQYPVA LFGILRAGMI VVNVNPLYTP RELEHQLNDS
GAAAIIIVSN FAHTLEKVVE KTSVQHVILT RMGDQLSTAK GTVVNFVVKY IKRLVPKYHL
PDAISFRSAL QHGYRMQYVK PEVVAEDLAF LQYTGGTTGV AKGAMLTHRN MLANLEQVKA
TYGPLLHPGK ELVVTALPLY HIFALTMNCL LFIELGGQNL LITNPRDIPG LVKELAKYPF
TAMTGVNTLF NALLNNKEFQ QLDFSSLHLS AGGGMPVQNV VAERWVKLTG QYLLEGYGLT
ECAPLVSVNP HDIDYHSGSI GLPVPSTEAK LVDDDDNEVA PGEAGELCVK GPQVMLGYWQ
RPDATDEIIK DGWLHTGDIA VMDEDGFLRI VDRKKDMILV SGFNVYPNEI EDVVMQHSGV
QEVAAVGVPS GSSGEAVKLF VVKKDPALTD DALITFCRRH LTGYKVPKQV EFREELPKSN
VGKILRRELR DEARGKVDNK A