Gene SNSL254_A1956 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSNSL254_A1956 
Symbolrnd 
ID6482156 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSalmonella enterica subsp. enterica serovar Newport str. SL254 
KingdomBacteria 
Replicon accessionNC_011080 
Strand
Start bp1912387 
End bp1913514 
Gene Length1128 bp 
Protein Length375 aa 
Translation table11 
GC content56% 
IMG OID642737324 
Productribonuclease D 
Protein accessionYP_002041074 
Protein GI194445618 
COG category[J] Translation, ribosomal structure and biogenesis 
COG ID[COG0349] Ribonuclease D 
TIGRFAM ID[TIGR01388] ribonuclease D 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.0000740588 
Plasmid hitchhikingNo 
Plasmid clonabilityunclonable 
 

Fosmid Coverage information

Num covering fosmid clones92 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
TTGAATTACC AAATGATTGA AACGGACGAT GCGCTGGCGA GCCTGTGTGA GGCTGTCCGC 
GCATGTCCGG CTATTGCTTT AGATACGGAA TTTGTCCGTA CCCGCACCTA TTACCCGCAG
TTAGGATTGA TCCAGTTATT TGACGGGGCA AATGTCGCCC TGATCGATCC GCTCGGCATC
AGCGACTGGT CGCCGTTAAA AGCGGTGTTG CGCGATACGG GAATCACCAA ATTTCTGCAC
GCGGGTAGCG AAGATCTGGA AGTATTTCTG AATGCGTTTG GCGAACTGCC GGAACCCCTG
ATTGATACGC AAATTCTGGC GGCGTTTTGC GGGCGTCCGC TGTCGTGGGG TTTTGCGTCG
ATGGTAGAAG AGTATACGGG CGTGGCGCTG GACAAAAGCG AGTCTCGTAC CGACTGGTTA
GCCCGGCCTT TAAGCGAACG TCAGTGTGAA TACGCGGCGG CGGATGTCTG GTATCTGTTA
CCGATCGCCA AAAAGCTGAT GATTGAAACT GAAGCCGCAG GATGGCTGCC TGCCGCGCTT
GATGAGTGTC GGTTGATGCA GCAGCGCCGT CAGGAGATTC AGGCGCCGGA AGAAGCATGG
CGGGATATCA CCAATGCCTG GCAACTGCGT ACTCGCCAGT TAGCCTGTCT GCAACTTTTA
GCTGACTGGC GGCTACGTAA GGCGCGTGAG CGCGATATGG CGGTGAACTT TGTTGTGCGT
GAAGAAAACC TGTGGGCGGT CGCGCGTTAT ATGCCGGGCA GTCTCGGTGA GCTGGATAGC
CTGGGGCTTT CCGGCAGCGA GATTCGCTTT CACGGCAAGA CGTTGATATC GCTGGTGGCG
AAAGCACAGG CGCTACCGGA AGAGGCATTG CCGGAACCCC TGTTGAATCT GATGGACATG
CCGGGCTATC GCAAAGCGTT TAAGGCCATC AAAGCGCTGG TGGCGGAGGT GAGCGCGTCG
CATCACGTCA GCGGCGAGCT ACTGGCATCG CGTCGGCAGA TTAATCAGTT GCTTAACTGG
CACTGGAAAT TAAAACCGCA AAATGGGCAA CCGGAATTGA TTTCCGGCTG GCGCGCCGAA
CTGATGGCGG AGAAGTTAAC TCTTCTGTTG CAGGAGTATC CGCGTTAA
 
Protein sequence
MNYQMIETDD ALASLCEAVR ACPAIALDTE FVRTRTYYPQ LGLIQLFDGA NVALIDPLGI 
SDWSPLKAVL RDTGITKFLH AGSEDLEVFL NAFGELPEPL IDTQILAAFC GRPLSWGFAS
MVEEYTGVAL DKSESRTDWL ARPLSERQCE YAAADVWYLL PIAKKLMIET EAAGWLPAAL
DECRLMQQRR QEIQAPEEAW RDITNAWQLR TRQLACLQLL ADWRLRKARE RDMAVNFVVR
EENLWAVARY MPGSLGELDS LGLSGSEIRF HGKTLISLVA KAQALPEEAL PEPLLNLMDM
PGYRKAFKAI KALVAEVSAS HHVSGELLAS RRQINQLLNW HWKLKPQNGQ PELISGWRAE
LMAEKLTLLL QEYPR