Gene SNSL254_A1942 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSNSL254_A1942 
Symbol 
ID6485727 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSalmonella enterica subsp. enterica serovar Newport str. SL254 
KingdomBacteria 
Replicon accessionNC_011080 
Strand
Start bp1902674 
End bp1904206 
Gene Length1533 bp 
Protein Length510 aa 
Translation table11 
GC content50% 
IMG OID642737310 
ProductSpoVR family protein 
Protein accessionYP_002041060 
Protein GI194446750 
COG category[S] Function unknown 
COG ID[COG2719] Uncharacterized conserved protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.334996 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones88 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGCAATGA TTGATTCCAT GAACAAGGAC ACCACACGTT TGAGCGATGG ACCCGACTGG 
ACATTTGATC TGCTGGATGT CTATCTGGCA GAGATAGACC GCGTGGCGAA GCTCTACCAA
CTGGATACTT ACCCGCACCA AATTGAAGTC ATCACTTCCG AACAGATGAT GGACGCCTAC
TCCAGCGTCG GGATGCCGAT CAACTATCCG CACTGGTCGT TTGGCAAAAA GTTCATTGAG
ACGGAACGTC TGTATAAGCA TGGTCAACAA GGACTGGCTT ATGAAATTGT GATCAACTCT
AATCCCTGCA TTGCCTACCT GATGGAAGAG AACACCATCA CCATGCAAGC GCTGGTCATG
GCGCACGCCT GTTACGGCCA CAACTCCTTT TTTAAAAATA ATTATCTCTT CCGGAGCTGG
ACGGATGCCA GCTCTATCGT CGACTACCTG ATTTTCGCCC GAAATTACAT TACCCGCTGT
GAAGAACGCT ACGGAGTGGA TGAAGTAGAA AAACTGCTCG ACTCCTGCCA CGCGCTGATG
AATTACGGCG TCGATCGCTA TAAGCGCCCG CAGAAAATCT CGTTGCAGGA AGAGAAAGCG
CGACAAAAAA GCCGGGAAGA GTATCTACAA AGCCAGGTGA ATATGCTGTG GCGCACGCTG
CCAAAACGCG AGGAAGAAAA AACTGTCACC GAAGCACGCC GCTTTCCCGC TGAACCGCAG
GAAAACCTGC TCTATTTTAT GGAGAAAAAC GCCCCGTTGC TCGAGCCGTG GCAGCGCGAA
ATTCTGCGCA TCGTGCGTAA AGTCAGCCAG TATTTTTATC CGCAGAAACA GACGCAGGTC
ATGAACGAGG GCTGGGCGAC CTTCTGGCAC TACACCATCC TGAACCATCT GTATGATGAA
GGCAAAGTGA CGGAACGCTT TATGCTGGAG TTTTTACACA GCCATACCAA TGTCGTATTT
CAGCCGCCCT ATAATAGCCC CTGGTATAGC GGAATTAACC CCTATGCGCT CGGCTTTGCC
ATGTTCCAGG ATATCAAACG TATTTGTCAG TCGCCCACGG ATGAAGATAA ATACTGGTTT
CCGGATATTG CCGGTTCCGA CTGGCTGGAA ACGCTGCACT TCGCCATGCG CGATTTTAAA
GATGAAAGCT TTATCAGTCA GTTCCTGTCG CCAAAAGTGA TGCGTGATTT CCGTTTCTTC
ACGGTACTTG ATGATGACAG GCATAATTAT CTGGAGATCT CCGCCATTCA TAACGAAGAA
GGTTATCGGG AGATTCGATC AAAACTGTCG TCACAGTATA ACCTGAGCAA CCTGGAGCCG
AATATTCAGG TCTGGAATGT GGATTTACGC GGCGACAGAT CGCTGACGTT GCGTTATATC
CCGCATAACC GCGCACCGCT GGATAAAGGC CGCAAAGAGG TGCTGAAACA TGTGCATCGG
TTATGGGGCT TTGATGTGAT GCTGGAGCAA CAAAATGAGG ATGGCAGCGT AGAACTGCTG
GAGCGTTGTC CGCCGCGCAT GAACACGCTG TAA
 
Protein sequence
MAMIDSMNKD TTRLSDGPDW TFDLLDVYLA EIDRVAKLYQ LDTYPHQIEV ITSEQMMDAY 
SSVGMPINYP HWSFGKKFIE TERLYKHGQQ GLAYEIVINS NPCIAYLMEE NTITMQALVM
AHACYGHNSF FKNNYLFRSW TDASSIVDYL IFARNYITRC EERYGVDEVE KLLDSCHALM
NYGVDRYKRP QKISLQEEKA RQKSREEYLQ SQVNMLWRTL PKREEEKTVT EARRFPAEPQ
ENLLYFMEKN APLLEPWQRE ILRIVRKVSQ YFYPQKQTQV MNEGWATFWH YTILNHLYDE
GKVTERFMLE FLHSHTNVVF QPPYNSPWYS GINPYALGFA MFQDIKRICQ SPTDEDKYWF
PDIAGSDWLE TLHFAMRDFK DESFISQFLS PKVMRDFRFF TVLDDDRHNY LEISAIHNEE
GYREIRSKLS SQYNLSNLEP NIQVWNVDLR GDRSLTLRYI PHNRAPLDKG RKEVLKHVHR
LWGFDVMLEQ QNEDGSVELL ERCPPRMNTL