| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | SNSL254_A1925 |
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| Symbol | |
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| ID | 6484894 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Salmonella enterica subsp. enterica serovar Newport str. SL254 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011080 |
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| Strand | + |
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| Start bp | 1884308 |
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| End bp | 1886101 |
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| Gene Length | 1794 bp |
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| Protein Length | 597 aa |
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| Translation table | 11 |
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| GC content | 56% |
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| IMG OID | 642737294 |
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| Product | hydrogenase 1 large subunit |
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| Protein accession | YP_002041044 |
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| Protein GI | 194445398 |
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| COG category | [C] Energy production and conversion |
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| COG ID | [COG0374] Ni,Fe-hydrogenase I large subunit |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 12 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 76 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAGTAACC AGTATCAAAC CCAGGGTTAT ACCGTTAACG ACGCCGGCCG TCGTCTGATC
GTGGACCCGA TTACCCGCAT CGAAGGGCAT ATGCGCTGCG AAGTGAACAT TGATGAGCAA
AACGTCATTA CCAATGCCGT TTCCTGCGGC ACAATGTTCC GCGGGCTGGA GATCATTCTG
CAAGGCCGTG ACCCGCGTGA CGCCTGGGCG TTTGTTGAAC GTATTTGTGG TGTCTGTACC
GGGGTACATG CTCTGGCGTC GGTGTACGCT ATCGAAGATG CGATTGGTAT CCAGGTACCG
GATAACGCCA ATATTATACG TAACATCATG CTGGCTACGT TGTGGTGCCA CGATCATCTG
GTCCATTTTT ATCAGTTAGC CGGTATGGAC TGGATTGATG TTCTGAATGC GCTGAAAGCC
GATCCGCGCG CCACCTCGCA GTTGGCGCAA AGCCTTTCCG CCTGGCCGAT GTCATCGCCG
GGCTACTTCT TTGACGTACA AAATCGATTG AAGAAATTTG TCGATGGCGG CCAGCTTGGG
ATATTCCGTA ACGGCTATTG GGGACATCCA CAGTACAAAC TGTCGCCAGA GGCTAATCTG
ATGGGGTTTG CCCACTATCT TGAAGCCCTC GACTTCCAGC GCGAGATCGT CAAAATCCAT
ACCATATTTG GCGGTAAGAA CCCCCATCCT AACTGGATCG TCGGCGGAAT GCCGTGCGCG
ATCAATCTCG ATCAAAGCGG CGCGGTTGGG GCTATCAATA TGGAGCGCCT CAACCTGGTG
CAGTCGATCA TCACCCGCAC CGCCGACTTC ATTAACAACG TGATGGTTCC GGACGCGCTG
GCTATCGGCC AGTTCAATAA AGCATGGAGT CAAATTGGCA CCGGTCTGTC GGATAAATGC
GTGCTGAGCT ACGGCGCATT TCCGGACATT GCCAACGACT TCAGCCAGCA AAGCCTGTTA
ATGCCGGGCG GCGCGGTGGT CAATGGCGAC TTTAAAAATG TCATGCCGGT AGATTTGGCC
GATCCGCAGC AGATACAGGA GTTTGTGGAT CACGCCTGGT ACCGCTATCC GGACGATCGG
CTGGGTCGTC ATCCTTTTGA CGGCATTACC GATCCCTGGT ACAACCCGGG TGATGTCAAA
GGCAGCGATA CGCATATCCA GCAGCTCAAC GAGCAGGAAC GCTACTCCTG GATTAAAGCG
CCGCGCTGGC GGGGTCATGC CATGGAAGTC GGCCCGCTTG CCCGAACGCT TATCGCGTAC
CACAAAGGGG ACGCCGCCAC CATAGAGTCG GTAGATCGCA TGATGTCCGC CCTTAAACTG
CCGCTCTCCG GTATCCAGTC TACGCTTGGC CGTATTTTAT GCCGCGCGCA CGAAGCGCAA
TGGGCCGTCG GTAAGCTGCA GTATTTTTTC GACAGGCTTA TGACCAACCT GAAAAACGGC
GACCTGGCCA CCGCCAATAC CGAGAAATGG GAACCGGCCA GTTGGCCGCA GCACTGCCGC
GGCATCGGTT TTACCGAAGC GCCTCGTGGA GCGTTGGGAC ACTGGGCGTC AATCCGCGAT
CAGAAGATTG AACTCTATCA GTGCGTGGTC CCCACCACCT GGAACGCCAG CCCGCGCGAT
CCTAAAAAAC AGATCGGCGC CTATGAAGCG GCATTGATGG GAACGCAAAT GGCGATTCCC
GACCAACCGT TAGAAATCCT GAGGACGCTG CACAGCTTCG ACCCCTGCCT CGCCTGTTCA
ACCCACGTGC TCGGCGACGA CGGCAGCGAA CTGATTGCCG TCCAGGTACG CTAA
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| Protein sequence | MSNQYQTQGY TVNDAGRRLI VDPITRIEGH MRCEVNIDEQ NVITNAVSCG TMFRGLEIIL
QGRDPRDAWA FVERICGVCT GVHALASVYA IEDAIGIQVP DNANIIRNIM LATLWCHDHL
VHFYQLAGMD WIDVLNALKA DPRATSQLAQ SLSAWPMSSP GYFFDVQNRL KKFVDGGQLG
IFRNGYWGHP QYKLSPEANL MGFAHYLEAL DFQREIVKIH TIFGGKNPHP NWIVGGMPCA
INLDQSGAVG AINMERLNLV QSIITRTADF INNVMVPDAL AIGQFNKAWS QIGTGLSDKC
VLSYGAFPDI ANDFSQQSLL MPGGAVVNGD FKNVMPVDLA DPQQIQEFVD HAWYRYPDDR
LGRHPFDGIT DPWYNPGDVK GSDTHIQQLN EQERYSWIKA PRWRGHAMEV GPLARTLIAY
HKGDAATIES VDRMMSALKL PLSGIQSTLG RILCRAHEAQ WAVGKLQYFF DRLMTNLKNG
DLATANTEKW EPASWPQHCR GIGFTEAPRG ALGHWASIRD QKIELYQCVV PTTWNASPRD
PKKQIGAYEA ALMGTQMAIP DQPLEILRTL HSFDPCLACS THVLGDDGSE LIAVQVR
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