Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | SNSL254_A1924 |
Symbol | |
ID | 6485437 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Salmonella enterica subsp. enterica serovar Newport str. SL254 |
Kingdom | Bacteria |
Replicon accession | NC_011080 |
Strand | + |
Start bp | 1883166 |
End bp | 1884311 |
Gene Length | 1146 bp |
Protein Length | 381 aa |
Translation table | 11 |
GC content | 57% |
IMG OID | 642737293 |
Product | hydrogenase-1 small chain |
Protein accession | YP_002041043 |
Protein GI | 194444862 |
COG category | [C] Energy production and conversion |
COG ID | [COG1740] Ni,Fe-hydrogenase I small subunit |
TIGRFAM ID | [TIGR00391] hydrogenase (NiFe) small subunit (hydA) [TIGR01409] Tat (twin-arginine translocation) pathway signal sequence |
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Plasmid Coverage information |
Num covering plasmid clones | 15 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 76 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | GTGCAAAAAG GAGAAAAAAT ACGCGTTATG AATAACGAGG AGACCTTTTA TCAAGCCATG CGTCGTAAGG GAGTGACCCG ACGCAGCTTT CTCAAATTCT GTAGCCTTGC CGCCACATCG CTGGGACTGG GCGCCGGAAT GACGCCAAAG ATCGCCTGGG CGCTGGAGAA TAAACCGCGG ATTCCGGTGG TCTGGATTCA TGGACTGGAA TGCACCTGCT GTACCGAATC CTTTATCCGT TCCTCGCACC CGCTAGCCAA AGATGTGATC CTCTCGCTGA TTTCCCTCGA TTATGACGAC ACCCTGATGG CCGCCGCCGG CGCACAGGCC GAAGAAGTCT TTGACGATAT TACCACTCGC TACGCCGGGA AATACATTCT GGCGGTGGAA GGCAATCCGC CGCTAGGAGA GCAAGGAATG TTCTGTATCA GCGGCGGCCG CCCGTTTATT GAAAAACTGA AGAAAGCCGC CGCGGGCGCC AGCGCTATTA TCGCCTGGGG AAACTGCGCC TCCTGGGGTT GCGTCCAGGC CGCCCGCCCC AATCCGACCC AGGCAACGCC TATCGATAAA GTGATCACCG ACAAGCCGAT CGTGAAAGTC CCTGGATGTC CACCAATCCC GGATGTCATG AGCGCCATTA TCACCTATAT GGTGACGTTT GATCGTCTGC CGGAACTCGA TCGCATGGGC CGTCCACTGA TGTTCTACGG TCAGCGTATC CACGATAAAT GCTACCGTCG CGCCCATTTT GACGCCGGTG AATTTGTCGA GAGCTGGGAT GATGACGCCG CCCGCAAGGG ATACTGTCTG TACAAGATGG GCTGTAAAGG GCCAACCACC TATAACGCCT GCTCCTCCAC TCGCTGGAAT GACGGCGTCT CCTTTCCTAT CCAGTCCGGT CACGGATGTC TGGGATGTTC AGAAAATGGT TTCTGGGATC GCGGCTCGTT TTATAGCCGC GTGGTGGATA TTCCCCAGAT GGGTACCCAT TCAACCGCCG ATACGGTGGG GCTGACCGCG CTGGGCGTGG TCGCGGCGGG CGTTGGCGGT CACGCTGTCG CCAGCGCGCT CAACCAACGT AAACGCCACA AACAACAGTT AGCGCAAGCC GAACAACAGC CGGACAATGA GGATAAACAG GCATGA
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Protein sequence | MQKGEKIRVM NNEETFYQAM RRKGVTRRSF LKFCSLAATS LGLGAGMTPK IAWALENKPR IPVVWIHGLE CTCCTESFIR SSHPLAKDVI LSLISLDYDD TLMAAAGAQA EEVFDDITTR YAGKYILAVE GNPPLGEQGM FCISGGRPFI EKLKKAAAGA SAIIAWGNCA SWGCVQAARP NPTQATPIDK VITDKPIVKV PGCPPIPDVM SAIITYMVTF DRLPELDRMG RPLMFYGQRI HDKCYRRAHF DAGEFVESWD DDAARKGYCL YKMGCKGPTT YNACSSTRWN DGVSFPIQSG HGCLGCSENG FWDRGSFYSR VVDIPQMGTH STADTVGLTA LGVVAAGVGG HAVASALNQR KRHKQQLAQA EQQPDNEDKQ A
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