Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | SNSL254_A1911 |
Symbol | ipk |
ID | 6485064 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Salmonella enterica subsp. enterica serovar Newport str. SL254 |
Kingdom | Bacteria |
Replicon accession | NC_011080 |
Strand | + |
Start bp | 1872826 |
End bp | 1873674 |
Gene Length | 849 bp |
Protein Length | 282 aa |
Translation table | 11 |
GC content | 55% |
IMG OID | 642737280 |
Product | 4-diphosphocytidyl-2-C-methyl-D-erythritol kinase |
Protein accession | YP_002041030 |
Protein GI | 194443768 |
COG category | [I] Lipid transport and metabolism |
COG ID | [COG1947] 4-diphosphocytidyl-2C-methyl-D-erythritol 2-phosphate synthase |
TIGRFAM ID | [TIGR00154] 4-diphosphocytidyl-2C-methyl-D-erythritol kinase |
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Plasmid Coverage information |
Num covering plasmid clones | 5 |
Plasmid unclonability p-value | 0.075732 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 68 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGACCCATT GGCCTTCTCC GGCAAAATTA AATCTGTTTT TATATATCAC CGGACAGCGA GCAGACGGCT ACCACACGCT GCAGACGCTG TTTCAGTTTC TGGATTATGG CGACACACTC CACATCGAAC CGCGTCACGA TGGCGAAATC CATTTATTAA CGCCGGTTAA CGGCGTTGAA AATGAAGACA ATCTGATCGT CCGTGCCGCG CGGCTGTTGA TGAAAGTCGC CTCGGAGAGT GGGCGCCTGC CCGCCGGAAG CGGTGCGGAT ATCAGCATTG AGAAGCGCCT TCCCATGGGC GGCGGTCTGG GCGGCGGCTC ATCTAACGCC GCGACCGTTC TGGTGGCGCT CAATCATCTT TGGCAATGCG GGCTTTCCAT TGATGAACTG GCGACGCTCG GCCTGACGCT CGGCGCCGAC GTCCCGGTCT TTGTTCGTGG CCACGCCGCG TTTGCCGAAG GCGTAGGCGA AATATTAACG CCGGTGAATC CGCCGGAAAA ATGGTATCTG GTCGCGCACC CTGGCGTAAG CATTCCCACA CCGGTTATCT TTAAAGATCC TCAATTGCCG CGTAATACGC CAAAAAGGTC AATAGATACG TTACTAAAAT GTGAATTCAG CAATGATTGC GAGGTTATCG CAAGAAAACG TTTTCGCGAG GTTGATGCGG CGCTTTCCTG GCTGTTAGAA TACGCGCCGT CGCGCCTGAC TGGGACAGGG GCCTGTGTCT TTGCTGAATT CGATACAGAG TCTTGTGCTC GCCAGGTGCT TGAGCAAGCC CCGGAATGGC TCAATGCTTT TGTGGCGAAG GGTGTCAACC TCTCCCCATT GCATCGAGAG TTACTCTAA
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Protein sequence | MTHWPSPAKL NLFLYITGQR ADGYHTLQTL FQFLDYGDTL HIEPRHDGEI HLLTPVNGVE NEDNLIVRAA RLLMKVASES GRLPAGSGAD ISIEKRLPMG GGLGGGSSNA ATVLVALNHL WQCGLSIDEL ATLGLTLGAD VPVFVRGHAA FAEGVGEILT PVNPPEKWYL VAHPGVSIPT PVIFKDPQLP RNTPKRSIDT LLKCEFSNDC EVIARKRFRE VDAALSWLLE YAPSRLTGTG ACVFAEFDTE SCARQVLEQA PEWLNAFVAK GVNLSPLHRE LL
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