Gene SNSL254_A1906 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSNSL254_A1906 
SymbolhemK 
ID6483808 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSalmonella enterica subsp. enterica serovar Newport str. SL254 
KingdomBacteria 
Replicon accessionNC_011080 
Strand
Start bp1868677 
End bp1869510 
Gene Length834 bp 
Protein Length277 aa 
Translation table11 
GC content59% 
IMG OID642737275 
ProductN5-glutamine S-adenosyl-L-methionine-dependent methyltransferase 
Protein accessionYP_002041025 
Protein GI194443667 
COG category[J] Translation, ribosomal structure and biogenesis 
COG ID[COG2890] Methylase of polypeptide chain release factors 
TIGRFAM ID[TIGR00536] HemK family putative methylases
[TIGR03534] protein-(glutamine-N5) methyltransferase, release factor-specific 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.0613255 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones62 
Fosmid unclonability p-value0.396695 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGATTTTC AGCACTGGCT GCATGAGGCG GTAAACCAGC TCCGGGACAG CGACAGCCCC 
CGGCGCGACG CCGAGATCCT GCTAGAGTAC GTTACGGGCA AGGGGCGGAC GTATATCATG
GCCTTTGGCG AAACGCCGCT TACCGACGTC CAGCAACAAC AGCTCGCGGA CCTGCTGCAG
CGGCGTAAAC AGGGCGAACC TATTGCGTAC CTGACGGGCT TACGCGAATT CTGGTCGCTG
CCGCTCTTCG TTTCTCCCGC CACGCTAATC CCGCGCCCGG ATACCGAATG TCTGGTTGAA
CAGGCGTTGG CGCGATTGCC GGTAAAAACC TGTCGTATTC TGGATTTAGG CACCGGAACC
GGCGCGATTG CGCTGGCGCT GGCCTGCGAG CGACCGGATT GCGAGGTGAC TGCGGTCGAT
CGTATGCCTG ATGCGGTTGC GCTGGCGATA CGCAACGCGG AACATTTGGC TATCCGGAAT
GTGCGTATAC TGCAAAGTTG TTGGTTCAGC GCGCTATCGG GGCAGCAGTT CGACATGATT
GTCAGCAATC CGCCCTACAT TGACGCGCAG GACCCGCACC TTAGCGAAGG CGATGTACGC
TTTGAACCGC GCTCGGCGTT GGTGGCGGAC GAAAACGGTA TGGCGGATCT TACGCATATT
ATCGATAACG CCCGCCAGAT GTTAACGCCC GGCGGCTTCC TGCTGCTGGA ACACGGTTGG
CAGCAGGGCG AAGCGGTAAG AGCGGTTTTC AGGCGGTCTG GTTACTCGGA TGTAGAAACG
TGTCGTGATT ATGGTGGTAA TGAACGCGTG ACCTGCGGAC GTTTTACGCC ATGA
 
Protein sequence
MDFQHWLHEA VNQLRDSDSP RRDAEILLEY VTGKGRTYIM AFGETPLTDV QQQQLADLLQ 
RRKQGEPIAY LTGLREFWSL PLFVSPATLI PRPDTECLVE QALARLPVKT CRILDLGTGT
GAIALALACE RPDCEVTAVD RMPDAVALAI RNAEHLAIRN VRILQSCWFS ALSGQQFDMI
VSNPPYIDAQ DPHLSEGDVR FEPRSALVAD ENGMADLTHI IDNARQMLTP GGFLLLEHGW
QQGEAVRAVF RRSGYSDVET CRDYGGNERV TCGRFTP