| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | SNSL254_A1881 |
|---|
| Symbol | |
|---|
| ID | 6483308 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Salmonella enterica subsp. enterica serovar Newport str. SL254 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_011080 |
|---|
| Strand | - |
|---|
| Start bp | 1846384 |
|---|
| End bp | 1847289 |
|---|
| Gene Length | 906 bp |
|---|
| Protein Length | 301 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 51% |
|---|
| IMG OID | 642737254 |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | YP_002041006 |
|---|
| Protein GI | 194443454 |
|---|
| COG category | [R] General function prediction only |
|---|
| COG ID | [COG1752] Predicted esterase of the alpha-beta hydrolase superfamily |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 7 |
|---|
| Plasmid unclonability p-value | 0.256375 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 63 |
|---|
| Fosmid unclonability p-value | 0.486913 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGAGAAAAA TGAAAATAGG GCTGGCGCTG GGATCTGGCG CAGCGAGAGG ATGGTCTCAT
ATTGGGGTCA TCAAAGCCCT CAAGCAAACA GGCATTGATA TTGATATCGT TGCAGGATGC
TCAATAGGTT CGCTGGTCGG CGCCGCGTAT GCCTGTAATA AATTATCGGC GCTTGAACAG
TGGGTATGTT CATTCCGCTA CTGGGATGTT TTACGCCTGA TGGATGTATC CTGGGGCAGA
GGAGGGTTGC TTCGCGGCGA ACGCGTATTT AATCACTATC GGGATATTAT GCCCGTCACG
GATTTTGACC ACTGTTCAAG ACGTTTTGGC GCGGTCGCGA CGAATCTTAG CACGGGACGA
GAGCTATGGT TTACTGAAGG CGATCTACAC CTTGCCGTAC GCGCGTCGTG CAGTATGCCA
GGGCTGATGT CTCCGGTTGA ACATAACGGT TACTGGCTGG TAGATGGCGC AGTCGTTAAT
CCGGTACCTG TTTCGTTAAC CAGGGCGCTG GGGGCTGATA TCGTTATTGC GGTAGACCTG
CAACATGATG CCCACCTCAT GCAGCAAGAT TTGCTCTCTG TAAATGTCGG GAATATCAAT
GAAGAGAGCG ATGATGCGCT GCCCTGGCAT AAGCGTTTAA AAGAACGTTT CAGTAGCCTG
ACTTCACGCC GTGGCGTGAG TTCGCCTGGG GCAATGGAAA TCATGACAAC CTCCATCCAG
GTGTTGGAAA ATCGTCTTAA ACGTAACCGT ATGGCTGGCG ATCCGCCTGA TATTCTCATT
CAACCATTCT GTCCGCAAAT CTCTACGCTG GATTTTCATC GCGCCCATGC CGCTATTGCG
GCGGGTCAGT TAGCCGTAGA GAAAAAGATG GACGAACTTA TACCCTTGGT GCGTACCGAC
GTTTAA
|
|---|
| Protein sequence | MRKMKIGLAL GSGAARGWSH IGVIKALKQT GIDIDIVAGC SIGSLVGAAY ACNKLSALEQ
WVCSFRYWDV LRLMDVSWGR GGLLRGERVF NHYRDIMPVT DFDHCSRRFG AVATNLSTGR
ELWFTEGDLH LAVRASCSMP GLMSPVEHNG YWLVDGAVVN PVPVSLTRAL GADIVIAVDL
QHDAHLMQQD LLSVNVGNIN EESDDALPWH KRLKERFSSL TSRRGVSSPG AMEIMTTSIQ
VLENRLKRNR MAGDPPDILI QPFCPQISTL DFHRAHAAIA AGQLAVEKKM DELIPLVRTD
V
|
|---|
| |