| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | SNSL254_A1859 |
|---|
| Symbol | |
|---|
| ID | 6482229 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Salmonella enterica subsp. enterica serovar Newport str. SL254 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_011080 |
|---|
| Strand | - |
|---|
| Start bp | 1824242 |
|---|
| End bp | 1824880 |
|---|
| Gene Length | 639 bp |
|---|
| Protein Length | 212 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 53% |
|---|
| IMG OID | 642737233 |
|---|
| Product | outer membrane protein W |
|---|
| Protein accession | YP_002040985 |
|---|
| Protein GI | 194445417 |
|---|
| COG category | [M] Cell wall/membrane/envelope biogenesis |
|---|
| COG ID | [COG3047] Outer membrane protein W |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 14 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 71 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGAAAAAAT TTACAGTGGC GGCACTGGCG TTAACAACTC TTCTCTCAGG CAGCGCTTTC
GCGCACGAAG CCGGAGAATT CTTTATGCGT GCAGGTCCGG CAACCGTCAG ACCTACAGAA
GGGGCGGGTG GTACGCTGGG GCATTTAAAC GGGTTTGATG TGAGTAATAA CACGCAACTC
GGCCTGACAT TCACTTACAT GGCGACGGAC AATATCGGGG TTGAATTGCT GGCGGCCACG
CCGTTCCGCC ATAAGGTGGG TACGGGCGCG ACGGGAGATA TCGCCACGGT CCACCTGTTA
CCGCCAACGT TAATGGCGCA GTGGTATTTC GGCGATTCCA GCAGCAAAGT GCGTCCTTAT
GTCGGCGTGG GGGTGAACTA CACCACCTTC TTCGATAACG ACTTTAACGA TAATGGTAAA
AATGCCGGGC TGTCCGATCT GAGCTTTAAG GATTCCTGGG GCGCGGCAGG GCAAGTTGGG
GTAGATTACC TGATTAACCG CGACTGGTTA ATTGGCGCCT CTGTCTGGTA CATGGATATT
GATACTACCG CCAATTATAA AATGGGCGGC GTTCAGCATC ATGACAGCGT GCGTCTGGAC
CCATGGGTAT TTATGTTCTC GGCAGGCTAT CGTTTCTAA
|
|---|
| Protein sequence | MKKFTVAALA LTTLLSGSAF AHEAGEFFMR AGPATVRPTE GAGGTLGHLN GFDVSNNTQL
GLTFTYMATD NIGVELLAAT PFRHKVGTGA TGDIATVHLL PPTLMAQWYF GDSSSKVRPY
VGVGVNYTTF FDNDFNDNGK NAGLSDLSFK DSWGAAGQVG VDYLINRDWL IGASVWYMDI
DTTANYKMGG VQHHDSVRLD PWVFMFSAGY RF
|
|---|
| |