Gene SNSL254_A1830 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSNSL254_A1830 
Symbol 
ID6486193 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSalmonella enterica subsp. enterica serovar Newport str. SL254 
KingdomBacteria 
Replicon accessionNC_011080 
Strand
Start bp1796616 
End bp1796942 
Gene Length327 bp 
Protein Length108 aa 
Translation table11 
GC content46% 
IMG OID642737205 
Producttranslation initiation factor Sui1 
Protein accessionYP_002040957 
Protein GI194445234 
COG category[J] Translation, ribosomal structure and biogenesis 
COG ID[COG0023] Translation initiation factor 1 (eIF-1/SUI1) and related proteins 
TIGRFAM ID[TIGR01158] translation initation factor SUI1, putative, prokaryotic 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.0277649 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value8.595610000000001e-28 
Fosmid HitchhikerYes 
Fosmid clonabilityhitchhiker 
 

Sequence

Gene sequence
ATGAGCGATT CCAATAGTCG TCTGGTTTAT TCAACACAGA CGGGGCGCAT TGAAGAACCT 
AAAACGGCGC CGGTTCGTCC CAAAGGGGAT GGTATCGTTC GCATTCAGCG TCAAACCAGT
GGCCGTAAGG GTAAAGGCGT ATGTTTGATT ACCGGTATCG AGATGAATGA TGCGGAATTA
ACCAAACTGG CGGCTGAACT GAAGAAAAAA TGCGGCTGTG GCGGGGCAGT AAAAGAAGGG
ATTATTGAAA TTCAGGGTGA TAAACGCGAC TTGATAAAAT CATTGCTGGA AGCTAAAGGA
ATGAAAGTAA AATTAGCTGG CGGCTAA
 
Protein sequence
MSDSNSRLVY STQTGRIEEP KTAPVRPKGD GIVRIQRQTS GRKGKGVCLI TGIEMNDAEL 
TKLAAELKKK CGCGGAVKEG IIEIQGDKRD LIKSLLEAKG MKVKLAGG