| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | SNSL254_A1807 |
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| Symbol | |
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| ID | 6486324 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Salmonella enterica subsp. enterica serovar Newport str. SL254 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011080 |
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| Strand | - |
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| Start bp | 1772536 |
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| End bp | 1774077 |
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| Gene Length | 1542 bp |
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| Protein Length | 513 aa |
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| Translation table | 11 |
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| GC content | 54% |
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| IMG OID | 642737183 |
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| Product | DNA-binding transcriptional regulator TyrR |
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| Protein accession | YP_002040935 |
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| Protein GI | 194443344 |
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| COG category | [E] Amino acid transport and metabolism
[K] Transcription |
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| COG ID | [COG3283] Transcriptional regulator of aromatic amino acids metabolism |
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| TIGRFAM ID | [TIGR00229] PAS domain S-box |
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Plasmid Coverage information |
| Num covering plasmid clones | 12 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 43 |
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| Fosmid unclonability p-value | 0.0010497 |
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| Fosmid Hitchhiker | Yes |
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| Fosmid clonability | hitchhiker |
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Sequence |
| Gene sequence | ATGCGTCTGG AAGTCTTTTG TGAAGACCGA CTTGGTCTGA CCCGCGAATT ACTTGATTTA
CTGGTGTTAC GTAGCATTGA TTTACGCGGA ATCGAGATTG ATCCCATTGG GCGAATTTAT
CTTAATTTTG CTGAGCTGGA ATTCACCGAC TTCAGCAGCC TGATGGCCGA AATCCGCCGT
ATTTCCGGCG TAACGGATGT CCGTACCGTT CCCTGGATGC CGTCCGAACG TGAACATCTG
GCCCTGAGCG CGCTGCTTGA GGCGTTGCCG GAGCCGGTGC TCTCATTGGA TATGAAGAGT
AAAGTGGAGA TGGCGAACCC GGCGAGTTGT CAGCTTTTTG CCCAGAGCCA GGAGCGAATG
CGGCACCATA CCGCCGCACA ATTAATCAAC GGCTTCAATT TTCAGCGCTG GCTGGACGGT
AACCCGCAAA GCTCCCATAA CGAACATGTC GTGATCAACG GGCAAAACTT CCTGATGGAG
ATTACGCCGG TACATTTACA AAACGAAAAT GACGAATACG TGTTGACCGG GGCGGTCGTG
ATGTTGCGTT CCACGATTCG TATGGGGCAG CAGCTACAGA ATTTGTCCAC GCAGGATCTG
AGCGCGTTTA GTCAGATTAT TGCCGTGAGC GCAAAGATGA AGCACGTCGT TGAGCAGGCG
CGCAAACTGG CGATGCTCAG CGCGCCGCTG CTGATTACCG GCGATACGGG AACCGGCAAA
GATCTTTTCG CCTATGCCTG TCACCAGGCA AGCCCTCGTT CAGCGAAACC GTATCTGGCG
CTCAACTGCG CTTCAATCCC GGAAGATGCG GTAGAAAGCG AACTATTTGG CCATGCGCCG
GAAGGTAAAA AAGGCTTTTT TGAACAGGCG AATGGCGGTT CGGTGCTGCT GGATGAAATT
GGCGAAATGT CGCCGCGTAT GCAGGCGAAG CTGCTGCGTT TTCTCAACGA TGGTACGTTC
CGTCGCGTCG GCGAAGATCA CGAAATTCAT GTTGATGTCC GCGTTATCTG CGCCACGCAG
AAAAATCTGG TGGAGCTGGT GCAAAAAGGA CTGTTCCGCG AAGATCTCTA TTATCGACTT
AACGTTCTGA CGCTTAATTT GCCGCCGTTG CGCGATTGCC CGCAGGATAT TATGCCGTTG
ACCGAACTGT TCGTGGCGCG TTTTGCCGAC GAACAGGGCG TTCCGCGACC GAAACTGTCT
GCCGATCTGA GTACGGTCCT CACTCGTTAC GGCTGGCCGG GTAACGTTCG CCAGCTTAAA
AATGCGATAT ACCGGGCGCT GACGCAACTG GAAGGGTATG AGCTGCGTCC GCAGGATATC
CTGCTGCCTG ACTACGATGC CGCGACGGTG GCAGTCGGCG AGGATGCGAT GGAAGGTTCG
CTGGATGACA TTACCAGTCG TTTTGAACGT TCTGTCCTTA CTCAGCTTTA TCGTAGCTAT
CCGAGTACGC GTAAACTGGC GAAACGGTTG GGGGTATCGC ATACCGCGAT TGCCAATAAG
CTGCGTGAAT ATGGTCTGAG CCAGAAGAAG GGTGAAGAGT AG
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| Protein sequence | MRLEVFCEDR LGLTRELLDL LVLRSIDLRG IEIDPIGRIY LNFAELEFTD FSSLMAEIRR
ISGVTDVRTV PWMPSEREHL ALSALLEALP EPVLSLDMKS KVEMANPASC QLFAQSQERM
RHHTAAQLIN GFNFQRWLDG NPQSSHNEHV VINGQNFLME ITPVHLQNEN DEYVLTGAVV
MLRSTIRMGQ QLQNLSTQDL SAFSQIIAVS AKMKHVVEQA RKLAMLSAPL LITGDTGTGK
DLFAYACHQA SPRSAKPYLA LNCASIPEDA VESELFGHAP EGKKGFFEQA NGGSVLLDEI
GEMSPRMQAK LLRFLNDGTF RRVGEDHEIH VDVRVICATQ KNLVELVQKG LFREDLYYRL
NVLTLNLPPL RDCPQDIMPL TELFVARFAD EQGVPRPKLS ADLSTVLTRY GWPGNVRQLK
NAIYRALTQL EGYELRPQDI LLPDYDAATV AVGEDAMEGS LDDITSRFER SVLTQLYRSY
PSTRKLAKRL GVSHTAIANK LREYGLSQKK GEE
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