Gene SNSL254_A1771 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSNSL254_A1771 
Symbol 
ID6486952 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSalmonella enterica subsp. enterica serovar Newport str. SL254 
KingdomBacteria 
Replicon accessionNC_011080 
Strand
Start bp1742484 
End bp1742918 
Gene Length435 bp 
Protein Length144 aa 
Translation table11 
GC content48% 
IMG OID642737148 
Productuniversal stress protein F 
Protein accessionYP_002040900 
Protein GI194442535 
COG category[T] Signal transduction mechanisms 
COG ID[COG0589] Universal stress protein UspA and related nucleotide-binding proteins 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones15 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones56 
Fosmid unclonability p-value0.0837729 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAACAGAA CGATTCTTGT ACCCATCGAT ATTTCAGATT CAGAATTAAC TCAACGCGTG 
ATTTCGCATG TTGAAGCCGA AGCAAAGATT GACGACGCTA AAGTGCACTT TTTGACTGTA
ATCCCGTCTT TGCCCTATTA CGCTTCCCTG GGACTGGCTT ATTCAGCAGA GCTTCCCGCA
ATGGACGATT TGAAAGCCGA AGCCAAATCT CAACTGGAAG CGATTATCAA GAAATTCAAC
CTTCCTGCGG ACCGCGTGCA GGCTCACGTT GCAGAAGGCT CTCCTAAAGA TAAGATTCTG
GAAATGGCAA AAAAATTACC GGCCGATATG GTGATTATCG CCTCGCATCG CCCGGATATT
ACTACCTATC TGTTGGGTTC CAACGCCGCA GCCGTTGTGC GTCATGCGGA ATGCTCCGTA
CTGGTGGTGC GCTAA
 
Protein sequence
MNRTILVPID ISDSELTQRV ISHVEAEAKI DDAKVHFLTV IPSLPYYASL GLAYSAELPA 
MDDLKAEAKS QLEAIIKKFN LPADRVQAHV AEGSPKDKIL EMAKKLPADM VIIASHRPDI
TTYLLGSNAA AVVRHAECSV LVVR