Gene SNSL254_A1763 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSNSL254_A1763 
Symbol 
ID6483120 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSalmonella enterica subsp. enterica serovar Newport str. SL254 
KingdomBacteria 
Replicon accessionNC_011080 
Strand
Start bp1733506 
End bp1736142 
Gene Length2637 bp 
Protein Length878 aa 
Translation table11 
GC content56% 
IMG OID642737142 
Producthypothetical protein 
Protein accessionYP_002040894 
Protein GI194443167 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones49 
Fosmid unclonability p-value0.0322713 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAAGGGTA AATATAAAGC CGCCCTTGCG CTACTGTTAC TGCTGATTCT TATCCCTCTG 
ACGCTACTGA TGACCCTCGG GCTGTGGGTT CCCACTCTGG CGGGAATTTG GCTACCCGTC
GGTACCCGTA TCGCTCTGGA ACAAAGTCCA CGCCTGACAC GTCATGGGTT AGTGATTCCC
GATCTTCGCT ATCTGGTCAA TGATTGTTCG TTAGCGCATA TTACCCAGGC GGAACTGACG
CATCCCAGCC GTTGGTTGCT GAATATTAAA AGCCTCAAAC TGGATGCCGC GTGCCTGGCG
AAACTGCCCG CTACGGAAGC TTCTCCCGCC GCGCCGCGTA CGCTGGCGCA GTGGCAGTCA
ATGCTGCCCA ATACCTGGAT TAACATCGAT AATGTCATTC TCGCGCCCTG GCCGGAATGG
CAGGGCAAGC TGGCGATCTC CATGACGCCG GTCATTCAGC AGATACGTTA TCAGGGCGAA
AAAGTAAAAT TTCAAGGGCA GCTACGCGGT CAGGCATTGA CGGTGAGCCA ACTGGAGATC
GCCGCGCTGG CCAACCAGCC TCCCGTTAGC CTGGCGGGGG AGTTTATGTT GCCGCTGGTA
CCGGATGGCC TGCCGGTCAG CGGTCATGCG GCAGCGACCT TGCGCCTGCC GCAGGAGCCG
TCGCTGGTGG ATGCGGAACT GGAGTGGCGT GATAACGCCG GACAGCTCAT CGTGATGGCG
CGAGGTAATC CTGACCCGAT TCTCGATCTC CCCTGGGCGG TAACGCGTCA GCGGCTTACC
ATCAGCGATG GCCGCTGGAA CTGGCCATAT CAGGGATTCC CCTTGAGCGG ACGTCTGGCT
TTTAATATCG ATAACTGGCA AGCCGGGCCG GATAATGCGC AAGTCAGCGG ACGCCTGAAT
ATTCTGACCC AGGGCGATGC CGGTAAAGCG AACGCGGTAC TGACTATCGG CCCGGGAAAA
CTCAGCATGG ATAGCAGTGA GATGCCTCTA CAGCTTACCG GCGAGGCTAA ACAGAAGGAT
TTAATCTTTT ATGCCGTCTT GCCCGCTATG TTCCGCGGCA GTCTGGCCGA TCCGCAGCTC
ACCTTTGCAC CTGGCGCATT GCTACGCTCA CGTGGGCGAG TGATTGATGC GTTAGATATT
GATGAAATTC GTTGGCCGCT GGCGGGCGTC AAGGTGACGC CGCGCGGCGT TGATGGTCGA
TTACAGGCTA TTTTACGGGC GCACGAAAAT GAGATGGGCG ATTTCGTTCT TCACCTTGAT
GGCCTGGCGA ATGATTTTCT CCCTGATGCT GGTCGCTGGC GGTGGCGCTA TTGGGGGCAA
GGAAGCTTTA CGCCAATGCG CGCCCGCTGG GATATTGCCG GACAGGGCGA ATGGCATGAT
AACACCATCA GGTTGACCAG TTTGTCCACC GGTTTTGATC AGTTGCACTA TGGCGCAATG
ACCGTCACAT CGCCAAGACT GGCGCTGAAT AAACCTATTG TCTGGGTTCG CGACGCCACA
ACGCCGTCGC TACAGGGCGC GCTGTCTCTG GAGGCGGGAA AAACCGTATT TACCAGCGGG
AGCGTGCTGC CGCCTTCTAC CATTAATTTT AGCGTTGAAG GGCGCGAGCC AACCCTGTTC
CAGTTTAAAG GCGACCTTCG GGCGGGGGCG ATAGGGCCGG TACGGCTGAA TGGGCGCTGG
GATGGCGAAC GCCTTCGCGG ACAGGCCTGG TGGCCGAAGC AGTCGCTTAT CGTTTTCCAG
CCGTTGCTTC CACCAGACTG GAAAATGACG CTGCGCGAAG GCTCACTGTA TGCGCAGGTG
GCTTTTTCCG CCGCACAGGG GCAGGGGTTT GAAGCGGGTG GACACGGCGT GTTAAAAGGC
GGCAGTGCCT GGATGCCGGA TAACAAAATC AACGGCGTCG ATTTCATTCT GCCATTTCGC
TTCCACAACG GCGCGTGGCA ATTGGGGACG CGCGGGCCCG TCTCGCTGCG TATTGCCGGG
ATAGTTAACC AGGTCACGGC GAAAAATATC ACTGCTGATT TACAGGGCGG TTATCCCTGG
AGCGAGTCGA ATCCATTACT GCTAAGCGAT GTCAGCGTAG ACGTGCTGGG CGGTCAAATC
ATTATGAAAC AGTTGCGAAT GCCGCAGCAC GACCCGGCGC TTTTGCGGGT GCAAAATATT
TCATCCAGCG AATTGATTAG CGCCATAAAT CCAAAGCAAT TCGCCATGTC TGGTCCGGTT
AGCGGCGCGC TGCCGCTGTG GCTGAACAAT GAAAAATGGA TAATCAAAGA TGGCTGGCTT
ACGAATCCCG GGCCAATGAC GTTGCGCATC GATAAAGATA CTGCGGATGC GGTGGTGAAG
GATAATGTCA CGGCAGGCTC GGCGATCAAC TGGCTACGTT ATATGGAGAT TACGCATTCG
TGGACGAAAA TTAACGTTGA TAACCTGGGC GTACTAACGA TGCAGGCGGC TATTACCGGC
AAAAGCCGGG TAGATGGTAA AACCGCGATC GTTAACTTGA ACTATACCCA TGAAGAAAAT
GTGTTTACGC TGTGGCGCAG TTTGCGTTTT GGCGACAATT TACAGGCATG GCTTGAACAA
AATACAGCGT TGCCGCAACC TCCTTGCCGG AAAGACAAGG ACTGTGAGGA TAAATAA
 
Protein sequence
MKGKYKAALA LLLLLILIPL TLLMTLGLWV PTLAGIWLPV GTRIALEQSP RLTRHGLVIP 
DLRYLVNDCS LAHITQAELT HPSRWLLNIK SLKLDAACLA KLPATEASPA APRTLAQWQS
MLPNTWINID NVILAPWPEW QGKLAISMTP VIQQIRYQGE KVKFQGQLRG QALTVSQLEI
AALANQPPVS LAGEFMLPLV PDGLPVSGHA AATLRLPQEP SLVDAELEWR DNAGQLIVMA
RGNPDPILDL PWAVTRQRLT ISDGRWNWPY QGFPLSGRLA FNIDNWQAGP DNAQVSGRLN
ILTQGDAGKA NAVLTIGPGK LSMDSSEMPL QLTGEAKQKD LIFYAVLPAM FRGSLADPQL
TFAPGALLRS RGRVIDALDI DEIRWPLAGV KVTPRGVDGR LQAILRAHEN EMGDFVLHLD
GLANDFLPDA GRWRWRYWGQ GSFTPMRARW DIAGQGEWHD NTIRLTSLST GFDQLHYGAM
TVTSPRLALN KPIVWVRDAT TPSLQGALSL EAGKTVFTSG SVLPPSTINF SVEGREPTLF
QFKGDLRAGA IGPVRLNGRW DGERLRGQAW WPKQSLIVFQ PLLPPDWKMT LREGSLYAQV
AFSAAQGQGF EAGGHGVLKG GSAWMPDNKI NGVDFILPFR FHNGAWQLGT RGPVSLRIAG
IVNQVTAKNI TADLQGGYPW SESNPLLLSD VSVDVLGGQI IMKQLRMPQH DPALLRVQNI
SSSELISAIN PKQFAMSGPV SGALPLWLNN EKWIIKDGWL TNPGPMTLRI DKDTADAVVK
DNVTAGSAIN WLRYMEITHS WTKINVDNLG VLTMQAAITG KSRVDGKTAI VNLNYTHEEN
VFTLWRSLRF GDNLQAWLEQ NTALPQPPCR KDKDCEDK