| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | SNSL254_A1728 |
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| Symbol | |
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| ID | 6485516 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Salmonella enterica subsp. enterica serovar Newport str. SL254 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011080 |
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| Strand | + |
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| Start bp | 1699558 |
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| End bp | 1700871 |
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| Gene Length | 1314 bp |
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| Protein Length | 437 aa |
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| Translation table | 11 |
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| GC content | 52% |
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| IMG OID | 642737108 |
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| Product | PTS system transporter subunit IIC |
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| Protein accession | YP_002040860 |
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| Protein GI | 194444879 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG3775] Phosphotransferase system, galactitol-specific IIC component |
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| TIGRFAM ID | [TIGR00827] PTS system, galactitol-specific IIC component |
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Plasmid Coverage information |
| Num covering plasmid clones | 6 |
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| Plasmid unclonability p-value | 0.259528 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 70 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGTTTGATT ACATCCTGTC TCTCGGCGGC ACCGTTTTTG TGCCCATCAT TATGATTATC
ATCGGCTTAA TCTTTCGTAT TCCCTGGCTA CAGGCGGTGA AAGCCGGGGT GACGGTCGGC
ATCGGTTTTG TCGGCATGGG GCTGGTGATC GTCATGGCGA TCGACAGTCT CAGTCCGCCG
ATTAAAGTGA TGATTGAGCG TTTTGGCCTG ACGCTGCATG TGTTTGACGT CGGCGCCGGG
CCCGCATCCG GCGTCGGCTA TGCGACGGCC ATCGGCGCGA TGATCATTCC CGTTATCTTT
CTGCTCAACG TCGGTATGCT GGTGACTCGT CTGACCAAAA CCATGAACGT TGATATTTAT
AACTACTGGC ACTACGCCAT TACCGGAACG GTCGTCCAGT TGATGACCGG CAGTCTGATT
TATGGCGTAC TGGGCGCGAT TTGCCACGCC GCCTTGTCGT TGAAAATGGC CGACTGGACG
GCGAAACGGG TACAGAACAT TGTGGGTCTG GAAGGGATTT CTATTCCGCA AGGGTATGGC
TCCAGCTCCG TGCCGTTGTT CGTATTGCTG GATGCGATAT ACGAAAAAAT ACCGTTTATG
AAAGGACGCA ATATTGACGC TCAGGAGATC CAAAAACGGT ATGGGATGGT CGGCGACCCG
GTGATCATTG GCGTTGTTCT CGGGCTGATC TTCGGGCTTG CCGCAGGCGA AGGCTTTAAA
GGGTGCGCAA CCTTAATGAT TACCGTGGCG GCGATTATGG TGCTGTTTCC GCGCATGATT
CGCCTTATCG TTGAGGGATT AATGCCCATT TCCGACGGCG CACGTAAGTT CTTCCAGAAA
CACTTTAAAG GGCGCGAAGT CTTTATCGGT CTGGATACCG CAGTGACGTT AGGCCACCCG
ACCACCATCG CGGTTGGACT GCTGTTAATT CCCATCATGT TAATTCTGGC GAGCATACTG
CCGGGCAATA AAGTCCTGCC GCTGGCTGAT TTACCGGTTG CGCCGTTTTT TATCTGCATG
GCCACGGTTA TTCATCGCGG CGATCTGATT CGTACTCTGC TCAGCGGCAT CATTGTCATG
ATTACCGTTC TGCTGATCGC CACCCAGTTC GCACCGTACT TTACCGATAT GGCGCTCAAA
GGCGGCTTTA GCTTCGCCGC TGAAAACGCG CAAATTACCG CGCTGTCGGT GGGAAATATG
TTTGGCTGGT CAATATCTGA ATTGATGTCG CTGGGCATGA TTGGCGTGGT TATTGTGGTC
GGCATTGTCG CCAGCATCAT ACTTGTCTTA CGTAAACGTG AACTACCGGA ATAA
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| Protein sequence | MFDYILSLGG TVFVPIIMII IGLIFRIPWL QAVKAGVTVG IGFVGMGLVI VMAIDSLSPP
IKVMIERFGL TLHVFDVGAG PASGVGYATA IGAMIIPVIF LLNVGMLVTR LTKTMNVDIY
NYWHYAITGT VVQLMTGSLI YGVLGAICHA ALSLKMADWT AKRVQNIVGL EGISIPQGYG
SSSVPLFVLL DAIYEKIPFM KGRNIDAQEI QKRYGMVGDP VIIGVVLGLI FGLAAGEGFK
GCATLMITVA AIMVLFPRMI RLIVEGLMPI SDGARKFFQK HFKGREVFIG LDTAVTLGHP
TTIAVGLLLI PIMLILASIL PGNKVLPLAD LPVAPFFICM ATVIHRGDLI RTLLSGIIVM
ITVLLIATQF APYFTDMALK GGFSFAAENA QITALSVGNM FGWSISELMS LGMIGVVIVV
GIVASIILVL RKRELPE
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