Gene SNSL254_A1719 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSNSL254_A1719 
Symbol 
ID6484645 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSalmonella enterica subsp. enterica serovar Newport str. SL254 
KingdomBacteria 
Replicon accessionNC_011080 
Strand
Start bp1692031 
End bp1692567 
Gene Length537 bp 
Protein Length178 aa 
Translation table11 
GC content53% 
IMG OID642737099 
ProductXRE family transcriptional regulator 
Protein accessionYP_002040851 
Protein GI194445981 
COG category[K] Transcription 
COG ID[COG1396] Predicted transcriptional regulators 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.499876 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones77 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGATAACC TGACACACTA TCTGGCGACC ACGTTAAGAA CGTTACGCCA TCAGCGAGGC 
TGGAGTTTAT CGCGTCTGGC GGAGATCTCC GGCGTCTCAA AAGCCATGTT GGGGCAGATA
GAGCGTAATG AATCCAGTCC GACAGTCGCA ACGCTGTGGA AAATTGCGAC GGGCCTGAAC
GTTCCATTCT CAATGTTTAT TTCGCCTCCG CAGGCCGAAT TTCCGCCAAC CTTCGATCCC
CAGCAGCAAG CGATGGTAAT CACACCGTTG TTTCCGTGGG ACCCTGAACT CTGTTTTGAC
TATTTTTCCC TATTGCTGGC GCCTGGCGCG GTCAGCGAAT CAACGCCGCA TAAAGCCGGC
GTTGTCGAAC ATGTGGTGGT GATTCAGGGT CGGCTGGACA TGTGTACTGG TGGGGTATGG
CAAACCATAG ACGCCGGTAA AGGATTGCGT TTTGCCGGCG ATACGGCGCA TACCTATTGC
AACAGCAGTG ACCAGACGGT TCATTTTCAC TCGCTGATCC ATTACCCACG TGATTAA
 
Protein sequence
MDNLTHYLAT TLRTLRHQRG WSLSRLAEIS GVSKAMLGQI ERNESSPTVA TLWKIATGLN 
VPFSMFISPP QAEFPPTFDP QQQAMVITPL FPWDPELCFD YFSLLLAPGA VSESTPHKAG
VVEHVVVIQG RLDMCTGGVW QTIDAGKGLR FAGDTAHTYC NSSDQTVHFH SLIHYPRD