| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | SNSL254_A1718 |
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| Symbol | |
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| ID | 6486517 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Salmonella enterica subsp. enterica serovar Newport str. SL254 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011080 |
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| Strand | - |
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| Start bp | 1689988 |
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| End bp | 1691952 |
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| Gene Length | 1965 bp |
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| Protein Length | 654 aa |
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| Translation table | 11 |
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| GC content | 53% |
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| IMG OID | 642737098 |
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| Product | peptidase, U32 family |
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| Protein accession | YP_002040850 |
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| Protein GI | 194444629 |
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| COG category | [O] Posttranslational modification, protein turnover, chaperones |
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| COG ID | [COG0826] Collagenase and related proteases |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 5 |
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| Plasmid unclonability p-value | 0.378979 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 75 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCGCCAGC AACCTCACTA TCTCGAATTG TTAAGTCCGG CCCGTGACGC CGCAATTGCT
CGCGAAGCGA TTTTGCATGG CGCAGATGCC GTCTACATCG GCGGACCCGG TTTTGGCGCA
CGTCATAACG CCAGTAACAG TCTGCGCGAT ATCGCCGATC TGGTTCCGTT TGCTCACCGT
TACGGCGCCA GGATTTTTGT CACGCTGAAT ACTATTCTGC ATGATGATGA GCTGGAGCCC
GCGCAGCGGT TAATCACCGA TTTGTACAAC ACCGGGGTGG ATGCGCTGAT TGTGCAGGAT
ATGGGCATTC TGGAACTGGA TATCCCGCCG ATTGAGCTTC ACGCCAGTAC ACAGTGTGAT
ATTCGCAGCG TGGAAAAAGC GAAGTTTCTT GCCGATGTCG GTTTTTCACA GATTGTACTG
GCGCGCGAAC TTAATTTGAG TCAGATAGCG GCTATTCATC AGGCTACTGA CGCCACAATT
GAGTTCTTCA TTCATGGCGC GCTGTGTGTC GCTTATTCTG GGCAGTGTTA TATCTCTCAT
GCGCAAACCG GGCGCAGCGC CAATCGGGGC GACTGTTCGC AGGCCTGTCG TTTACCGTAT
ACGTTAAAAG ACGATCAGGG GCGGGTGGTC TCTTACGAAA AACATTTGCT ATCGATGAAA
GATAACGACC AAACGGCTAA CCTCGGCGCG TTGATCGATG CAGGCGTACG TTCCTTCAAG
ATTGAAGGGC GCTATAAAGA CATGAGCTAT GTCAAAAACA TCACCGCGCA TTATCGTCAG
ATGCTGGACG CGATTATCGA GCAACGTGGC GATCTGGCGC GTGCGTCGGT TGGTCGGACC
GAACACTTTT TTGTTCCCTC CACGGAGAAA ACCTTCCATC GCGGCAGCAC CGACTATTTT
GTTAACGCGC GTAAAGGTGA TATTGGCGCA TTTGATTCAC CAAAATTTAT TGGCTTGCCG
GTAGGTGAGG TGCTGAATGT GGCGAAGGAT TATCTCGACG TAGAAGCTAC GGAGCCGTTG
GCGAATGGCG ATGGTCTGAA CGTGTTGATT AAGCGTGAAG TGGTAGGTTT TCGCGCCAAT
ACGGTGGAGA AAACCGGTCA TAACCGCTAC CGCGTTTGGC CAAATGATAT GCCTGCCGAC
CTGCATAAAG TCCGTCCGCA TCATCCGTTG AATCGTAATC TGGATCATAA CTGGCAGCAA
GCGCTGACAA AAACCTCCAG TGAGCGCCGT GTGGCGGTTG ATATCATGCT GGGCGGCTGG
CAGGAACAGC TTATTCTGAC GCTGACCAGT GAAGACGGTG TCTGCATCAC GCATACGCTT
GATGGGGTAT TTGAGGAAGC CAACAACGCT GAAAAAGCGT TGAATAACCT AAAAGCCGGA
CTGGCGAAGC TGGGACAGAC GCCTTACTAC GCGCGTGATA TGCAGGTGAC ATTACCGGCG
GCGTTGTTCG TGCCAAATAG CCTGCTCAAT CAGTTCCGTC GGGAGGCGAT TGATATGCTT
GACGCGGCGC GGCTGGCCCA TTATCAACGA GGTCGTCGGA AACCCGTGGC GCAGCCTGCG
CCGGTCTACC CGCAAACGCA TCTCAGCTTT CTCGCTAATG TCTACAACCA CAAAGCGCGG
GAATTTTATC ACCGTTACGG CGTACAATTG ATTGATGCGG CCTATGAGGC GCATCAGGAG
AAGGGCGAGG TACCGGTCAT GATCACCAAA CACTGCCTGC GTTTTGCGTT CAACCTTTGT
CCAAAGCAGG CGAAAGGAAA TATTAAGAGC TGGAAAGCCA CGCCGATGCA GTTGGTGCAT
GGCGATGAGG TACTGACGCT AAAATTCGAC TGCCGCCCTT GCGAAATGCA TGTCATTGGC
AAAATTAAAA ACCACATCTT AAAAATGCCC CAGCCCGGCA GCGTTGTCGC TTCAGTGAGC
CCTGAAGCGC TGATGAAAAC GCTGCCGAAG CGCAGGGGCG TTTAA
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| Protein sequence | MRQQPHYLEL LSPARDAAIA REAILHGADA VYIGGPGFGA RHNASNSLRD IADLVPFAHR
YGARIFVTLN TILHDDELEP AQRLITDLYN TGVDALIVQD MGILELDIPP IELHASTQCD
IRSVEKAKFL ADVGFSQIVL ARELNLSQIA AIHQATDATI EFFIHGALCV AYSGQCYISH
AQTGRSANRG DCSQACRLPY TLKDDQGRVV SYEKHLLSMK DNDQTANLGA LIDAGVRSFK
IEGRYKDMSY VKNITAHYRQ MLDAIIEQRG DLARASVGRT EHFFVPSTEK TFHRGSTDYF
VNARKGDIGA FDSPKFIGLP VGEVLNVAKD YLDVEATEPL ANGDGLNVLI KREVVGFRAN
TVEKTGHNRY RVWPNDMPAD LHKVRPHHPL NRNLDHNWQQ ALTKTSSERR VAVDIMLGGW
QEQLILTLTS EDGVCITHTL DGVFEEANNA EKALNNLKAG LAKLGQTPYY ARDMQVTLPA
ALFVPNSLLN QFRREAIDML DAARLAHYQR GRRKPVAQPA PVYPQTHLSF LANVYNHKAR
EFYHRYGVQL IDAAYEAHQE KGEVPVMITK HCLRFAFNLC PKQAKGNIKS WKATPMQLVH
GDEVLTLKFD CRPCEMHVIG KIKNHILKMP QPGSVVASVS PEALMKTLPK RRGV
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