Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | SNSL254_A1616 |
Symbol | |
ID | 6482346 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Salmonella enterica subsp. enterica serovar Newport str. SL254 |
Kingdom | Bacteria |
Replicon accession | NC_011080 |
Strand | + |
Start bp | 1581709 |
End bp | 1582923 |
Gene Length | 1215 bp |
Protein Length | 404 aa |
Translation table | 11 |
GC content | 55% |
IMG OID | 642737002 |
Product | starvation sensing protein RspA |
Protein accession | YP_002040754 |
Protein GI | 194446054 |
COG category | [M] Cell wall/membrane/envelope biogenesis [R] General function prediction only |
COG ID | [COG4948] L-alanine-DL-glutamate epimerase and related enzymes of enolase superfamily |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 11 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 84 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAAGATTG TAGGGGCTGA AGTTTTTGTT ACGTGTCCAG GGCGTAACTT CGTCACCTTA AAGATAACCA CGGAAGACGG GATCACCGGT CTGGGGGATG CCACCCTGAA CGGACGCGAG CTCCCGGTGG CCTCGTACCT TACCGATCAC CTGTGCCCAC AGCTCATCGG GCGGGATGCT CGCCGCATCG AAGATATTTG GCAGTTCTTC TACAAAGGCG CGTACTGGCG CCGTGGCCCT GTCACCATGT CCGCCATTTC CGCGGTTGAT ATGGCGCTAT GGGATATTAA AGCCAAAGCC GCCAATATGC CGTTGTATCA GTTACTCGGC GGCGCTTCGC GTGAAGGCGT CATGGTGTAT TGCCATACCA CAGGCCACAC CATCGACGAT GTGCTGGAAG ACTACGCGCG TCATAAAGAG CAAGGGTTCA AAGCAATCCG CGTGCAGTGC GGCGTTCCGG GGATGAAAAC CACCTACGGC ATGGCGAAAG GCAAGGGGCT GGCCTATGAG CCCGCGACAA AAGGCCAGTG GCCGGAAGAA CAATTGTGGT CAACAGAAAA GTATCTCGAT TTTACGCCAA AGCTGTTTGA CGCCGTGCGT AATACGTTCG GTTTTAATGA ACATCTTCTG CACGATATGC ATCACCGGCT GACGCCTATT GAGGCTGCCC GCTTTGGCAA ACGTATTGAA GACTATCGTT TGTTCTGGAT GGAAGACCCG ACGCCGGCTG AAAATCAGGC GTGCTTCCGC CTCATCCGCC AGCATACGGT CACGCCGATT GCCGTAGGCG AAGTCTTTAA CAGTATCTGG GATTGCAAAC AGCTCATTGA AGAGCAATTG ATTGACTATA TCCGCACCAC GCTTACCCAT GCCGGTGGTA TTACCGGGAT GCGCCGCATT GCCGATTTTG CCTCGCTCTA CCAGGTGCGT ACCGGTTCGC ATGGGCCGTC CGATCTGTCG CCGGTTTGTA TGGCCGCTGC ATTACATTTC GACCTGTGGG TGCCTAACTT TGGCGTGCAG GAGTTTATGG GCTACTCCGA ACAGATGCTG GAGGTTTTCC CGCATAACTG GACGTTCGAG GGCGGCTATA TGCATCCGGG CGACAAGCCA GGACTGGGCA TTGAGTTCGA TGAAAAACTG GCGGCGAAAT ATCCGTACGA TCCAGCCTAT TTGCCGGTGG CCCGCCTGGA AGACGGCACA CTGTGGAACT GGTAA
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Protein sequence | MKIVGAEVFV TCPGRNFVTL KITTEDGITG LGDATLNGRE LPVASYLTDH LCPQLIGRDA RRIEDIWQFF YKGAYWRRGP VTMSAISAVD MALWDIKAKA ANMPLYQLLG GASREGVMVY CHTTGHTIDD VLEDYARHKE QGFKAIRVQC GVPGMKTTYG MAKGKGLAYE PATKGQWPEE QLWSTEKYLD FTPKLFDAVR NTFGFNEHLL HDMHHRLTPI EAARFGKRIE DYRLFWMEDP TPAENQACFR LIRQHTVTPI AVGEVFNSIW DCKQLIEEQL IDYIRTTLTH AGGITGMRRI ADFASLYQVR TGSHGPSDLS PVCMAAALHF DLWVPNFGVQ EFMGYSEQML EVFPHNWTFE GGYMHPGDKP GLGIEFDEKL AAKYPYDPAY LPVARLEDGT LWNW
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