Gene SNSL254_A1584 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSNSL254_A1584 
Symbol 
ID6485664 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSalmonella enterica subsp. enterica serovar Newport str. SL254 
KingdomBacteria 
Replicon accessionNC_011080 
Strand
Start bp1550750 
End bp1551481 
Gene Length732 bp 
Protein Length243 aa 
Translation table11 
GC content53% 
IMG OID642736970 
ProductDNA-binding transcriptional regulator RstA 
Protein accessionYP_002040722 
Protein GI194442705 
COG category[K] Transcription
[T] Signal transduction mechanisms 
COG ID[COG0745] Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.163508 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones66 
Fosmid unclonability p-value0.857869 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAACCGCA TTGTATTTGT TGAAGACGAC GCTGAAGTGG GTTCTCTCAT TGCCGCTTAT 
CTGGCGAAAC ATGATATTGA TGTCATTGTT GAGCCGCGTG GTGACCGGGC GGAGGATCTT
ATCCTCACCA CTCAGCCCGA TCTGGTTTTA CTGGATATTA TGCTTCCAGG TAAAGATGGC
ATGACGATAT GCCGCGATTT ACGCCACCGC TGGCAAGGCC CGATTGTCCT GCTCACCTCG
CTGGACAGTG ATATGAATCA TATTCTGGCG CTGGAGATGG GCGCCTGCGA CTACATCCTC
AAAACCACGC CTCCGGCCGT TTTGCTGGCG CGTCTGCGCT TACACCTGCG GCAAAGCGAA
CAAACGCAAC AGGCAAAAAG TCTTCAGGAG AGCGCGCTTA CGCCGCATAA AGCGCTGCGT
TTTGGCGCGT TAACCATCGA TCCCCTTAAC CGGGCGGTCC AGCTCAATGG CGATTTCATA
TCGCTCTCCA CCGCCGATTT TGAATTGCTC TGGGAACTGG CGACACACGC CGGACAAATT
ATGGATCGCG ACGCGTTGCT AAAAACGCTG CGCGGCGTCA ATTATGATGG TCTGGATCGC
AGCGTGGATG TGGCGATTTC CCGCCTGCGT AAGAAACTGC TGGATAGCGC TGCTGAGCCC
TATCGTATAA AGACCATTCG CAATAAAGGC TATCTTTTTG CCCCTCATGC CTGGGACGAA
ACGACGGGAT AA
 
Protein sequence
MNRIVFVEDD AEVGSLIAAY LAKHDIDVIV EPRGDRAEDL ILTTQPDLVL LDIMLPGKDG 
MTICRDLRHR WQGPIVLLTS LDSDMNHILA LEMGACDYIL KTTPPAVLLA RLRLHLRQSE
QTQQAKSLQE SALTPHKALR FGALTIDPLN RAVQLNGDFI SLSTADFELL WELATHAGQI
MDRDALLKTL RGVNYDGLDR SVDVAISRLR KKLLDSAAEP YRIKTIRNKG YLFAPHAWDE
TTG