Gene SNSL254_A1580 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSNSL254_A1580 
Symbol 
ID6483252 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSalmonella enterica subsp. enterica serovar Newport str. SL254 
KingdomBacteria 
Replicon accessionNC_011080 
Strand
Start bp1545848 
End bp1547149 
Gene Length1302 bp 
Protein Length433 aa 
Translation table11 
GC content54% 
IMG OID642736966 
Productsensor protein RstB 
Protein accessionYP_002040718 
Protein GI194442422 
COG category[T] Signal transduction mechanisms 
COG ID[COG0642] Signal transduction histidine kinase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.118094 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones61 
Fosmid unclonability p-value0.442453 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAAAAAGC TGTTTGTGCA GTTTTACCTT TTGCTGTTCG TCTGTTTTCT GGTCATGACC 
TTATTGGTCG GACTGGTGTA CAAATTCACC GCCGAACGCG CGGGCAGGCA ATCGCTCGAC
GATCTGATGA AAAGTTCGCT CTATCTGATG CGCAGCGAAC TGCGGGAAAT TCCGCCGCGT
GAATGGGGGA AAACGTTAAA AGAGATGGAC CTGAACCTCT CTTTCGATTT ACGCGTTGAA
CCGTTAAATC ACTATAAGCT TGATGCCGCC ACCACGCAGC GACTGCGTGA AGGCGATATT
GTCGCGCTTG ACGATCAATA CACCTTTATT CAGCGTATCC CGCGCAGCCA TTACGTCCTG
GCGGTTGGCC CGGTTCCCTA TCTCTATTTC CTGCATCAAA TGCGACTGCT GGATATCGCC
TTAATGGCGC TCATTGCCTT TTCTCTCGCC TTTCCTGTGT TTATCTGGAT GCGCCCGCAC
TGGCAAGAAA TGCTCAGGCT CGAATCCGCC GCGCAGCGCT TTGGCGAGGG TCATTTGACT
GAACGCCTGC ACTTCGATAA TGGCTCCAGT TTCGAACGTC TGGGCGTCGC GTTCAACCAG
ATGGCGGATA ACATTAATGC CCTGATCGCC AGTAAAAAAC AGCTGATTGA CGGTATCGCC
CATGAGCTTC GCACGCCGCT GGTACGTTTA CGCTATCGGC TTGAAATGAG TGAAAATCTG
ACACCGCCGG AATCACAGGC GCTCAATCGC GATATTGGTC AACTGGAAGC GCTGATTGAA
GAACTGCTCA CCTATGCGCG CCTTGACCGA CCGCAAAATG AACTGATGTT GACCGAACCC
GACCTCCCCG CCTGGTTGCT CGCGCATTTG CAGGATGTGC AAAGCGTGAC CCCGGAACGC
GCCGTAAACC TTGTCACATG TGTAATCGGC GATTATGGCG CGCTTGATAT GCGGTTAATG
TCGCGAGTGC TGGATAACCT GCTGAATAAT GCGTTGCGCT ACAGTCGTAC CACCGTTCAA
GTCAGCCTGT TACTCGACGG CAGTCAGGCA ACGTTGATAG TCGAAGATGA TGGCCCCGGC
ATTGAAGCGG ATGCGCGAGA GCGCGTATTT GAACCTTTTG TCAGACTCGA CCCCAGTAGA
GACCGGGCGA CAGGCGGCTG CGGGCTTGGA CTCGCCATCG TACACTCTAT CGCACTGGCG
ATGGGCGGTA GCGTCGTCTG TGACGAGAGC GAACTGGGCG GCGCAAAATT TAGCTTTCGC
TGGCCGGTCT GGCACGCGAT GCCCGACATG ACCGCTGCCT GA
 
Protein sequence
MKKLFVQFYL LLFVCFLVMT LLVGLVYKFT AERAGRQSLD DLMKSSLYLM RSELREIPPR 
EWGKTLKEMD LNLSFDLRVE PLNHYKLDAA TTQRLREGDI VALDDQYTFI QRIPRSHYVL
AVGPVPYLYF LHQMRLLDIA LMALIAFSLA FPVFIWMRPH WQEMLRLESA AQRFGEGHLT
ERLHFDNGSS FERLGVAFNQ MADNINALIA SKKQLIDGIA HELRTPLVRL RYRLEMSENL
TPPESQALNR DIGQLEALIE ELLTYARLDR PQNELMLTEP DLPAWLLAHL QDVQSVTPER
AVNLVTCVIG DYGALDMRLM SRVLDNLLNN ALRYSRTTVQ VSLLLDGSQA TLIVEDDGPG
IEADARERVF EPFVRLDPSR DRATGGCGLG LAIVHSIALA MGGSVVCDES ELGGAKFSFR
WPVWHAMPDM TAA