| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | SNSL254_A1544 |
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| Symbol | rnt |
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| ID | 6485877 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Salmonella enterica subsp. enterica serovar Newport str. SL254 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011080 |
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| Strand | - |
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| Start bp | 1511142 |
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| End bp | 1511789 |
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| Gene Length | 648 bp |
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| Protein Length | 215 aa |
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| Translation table | 11 |
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| GC content | 53% |
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| IMG OID | 642736931 |
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| Product | ribonuclease T |
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| Protein accession | YP_002040683 |
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| Protein GI | 194445493 |
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| COG category | [L] Replication, recombination and repair |
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| COG ID | [COG0847] DNA polymerase III, epsilon subunit and related 3'-5' exonucleases |
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| TIGRFAM ID | [TIGR01298] ribonuclease T |
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Plasmid Coverage information |
| Num covering plasmid clones | 9 |
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| Plasmid unclonability p-value | 0.554445 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 82 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGTCCGATA ACGCTCAACT TTCCGGTCTG TGCGACCGTT TTCGTGGTTT TTATCCTGTC
GTCATCGACG TTGAAACTGC AGGATTTAAC GCTAAAACCG ATGCGCTGCT CGAAATCGCC
GCCATCACGC TGAAAATGGA TGAACAAGGC TGGCTGATGC CGGACATGAC GCTGCATTTC
CATGTGGAGC CGTTCGCTGG AGCCAACTTA CAGCCGGAAG CGCTTGCGTT TAACGGTATC
GATCCCTCTA ACCCGCTACG CGGCGCGGTG AGTGAATATG AGGCGCTACA CGCTATTTTC
AAAATGGTGC GTAAAGGTAT CAAAGACAGC GGTTGTAGCC GCGCCATTAT GGTCGCGCAT
AACGCCACTT TTGATCACAG TTTTATGATG GCCGCCGCAG AGCGCGCCTC GCTGAAACGT
AACCCGTTTC ATCCGTTCGT CACCTTTGAT ACTGCGGCAT TGAGCGGACT GGCGCTGGGA
CAAACGGTGT TATCAAAAGC GTGCCTGGCG GCAGGTATGG AGTTTGACGG TGAAAAAGCC
CATTCCGCTT TGTATGATAC CGAGCGGACA GCGGTGCTGT TTTGTGAAAT CGTCAATCGC
TGGAAGCGCC TGGGCGGCTG GCCGTTACCT TTGTCGACGG ACAAATAA
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| Protein sequence | MSDNAQLSGL CDRFRGFYPV VIDVETAGFN AKTDALLEIA AITLKMDEQG WLMPDMTLHF
HVEPFAGANL QPEALAFNGI DPSNPLRGAV SEYEALHAIF KMVRKGIKDS GCSRAIMVAH
NATFDHSFMM AAAERASLKR NPFHPFVTFD TAALSGLALG QTVLSKACLA AGMEFDGEKA
HSALYDTERT AVLFCEIVNR WKRLGGWPLP LSTDK
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