| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | SNSL254_A1471 |
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| Symbol | |
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| ID | 6482523 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Salmonella enterica subsp. enterica serovar Newport str. SL254 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011080 |
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| Strand | - |
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| Start bp | 1439835 |
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| End bp | 1440701 |
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| Gene Length | 867 bp |
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| Protein Length | 288 aa |
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| Translation table | 11 |
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| GC content | 48% |
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| IMG OID | 642736862 |
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| Product | quinate/shikimate dehydrogenase |
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| Protein accession | YP_002040616 |
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| Protein GI | 194445061 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG0169] Shikimate 5-dehydrogenase |
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| TIGRFAM ID | [TIGR00507] shikimate 5-dehydrogenase |
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Plasmid Coverage information |
| Num covering plasmid clones | 9 |
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| Plasmid unclonability p-value | 0.75458 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 50 |
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| Fosmid unclonability p-value | 0.0124621 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGATGTTA CCGCAAAATA TGAATTAATT GGTCTTATGG CGTATCCTAT CCGTCATAGC
TTATCGCCCG AAATGCAAAA CAAAGCGTTA GAAAAAGCGG GGCTACCGTA TACCTATATG
GCTTTCGAAG TGGATAACAC GACGTTTGCC AGCGCCATTG AAGGACTGAA AGCATTAAAA
ATGCGCGGTA CGGGCGTCTC CATGCCAAAC AAACAGCTCG CGTGTGAGTA TGTCGATGAA
TTAACGCCAG CAGCAAAACT GGTTGGCGCT ATCAACACCA TTGTTAACGA TGACGGCTAT
CTACGCGGCT ACAACACGGA TGGTACGGGC CATATTCGGG CAATTAAAGA AAGCGGTTTC
GATATTCGGG GAAAAACCAT GGTGCTGCTC GGCGCGGGAG GCGCGGCTAC CGCCATTGGC
GCCCAGGCAG CCATTGAAGG CATTAAGGAA ATTAAACTGT TTAACCGTAA AGATGACTTT
TTCGAAAAAG CGGTTGCCTT TGCGAAGCGG GTGAATGAAA ACACCGATTG CGTCGTTACC
GTCACCGATC TTGCCGATCA GCACGCTTTT ACTGAAGCGC TTGCCAGCGC AGATATTCTG
ACGAACGGTA CCAAAGTTGG CATGAAACCA TTGGAGAACG AATCCCTGAT CGGCGATGTT
TCCCTGCTCC GCCCTGAATT GCTGGTCACC GAATGTGTTT ATAATCCGCA TATGACAAAG
TTATTGCAGC AGGCGCAACA AGCTGGTTGC AAAACAATTG ATGGTTACGG CATGTTGTTA
TGGCAAGGAG CCGAACAGTT TGAACTGTGG ACAGGAAAAG CATTTCCATT GGACTATGTG
AAGCAGGTGA TGGGATTCAC AGCCTGA
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| Protein sequence | MDVTAKYELI GLMAYPIRHS LSPEMQNKAL EKAGLPYTYM AFEVDNTTFA SAIEGLKALK
MRGTGVSMPN KQLACEYVDE LTPAAKLVGA INTIVNDDGY LRGYNTDGTG HIRAIKESGF
DIRGKTMVLL GAGGAATAIG AQAAIEGIKE IKLFNRKDDF FEKAVAFAKR VNENTDCVVT
VTDLADQHAF TEALASADIL TNGTKVGMKP LENESLIGDV SLLRPELLVT ECVYNPHMTK
LLQQAQQAGC KTIDGYGMLL WQGAEQFELW TGKAFPLDYV KQVMGFTA
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