Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | SNSL254_A1468 |
Symbol | |
ID | 6486527 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Salmonella enterica subsp. enterica serovar Newport str. SL254 |
Kingdom | Bacteria |
Replicon accession | NC_011080 |
Strand | - |
Start bp | 1436118 |
End bp | 1437269 |
Gene Length | 1152 bp |
Protein Length | 383 aa |
Translation table | 11 |
GC content | 50% |
IMG OID | 642736859 |
Product | putative acyl-CoA dehydrogenase |
Protein accession | YP_002040613 |
Protein GI | 194445957 |
COG category | [I] Lipid transport and metabolism |
COG ID | [COG1960] Acyl-CoA dehydrogenases |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 6 |
Plasmid unclonability p-value | 0.283366 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 55 |
Fosmid unclonability p-value | 0.0792636 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGGATTTTT CATTAACTGA AGAACAAGAA CTATTACTGG CCAGTATTCG CGAGTTAATC ACCAGCAATT TTCCGGAAGA GTATTTCCGT ACCTGCGATC AAACGGGCAC CTATCCCAAA GAATTTATGC AGGCGCTGGC GGAAAACGGT ATTTCGATGC TGGGCGTCCC GGAAGAATTC GGCGGCATTC CGGCTGACTA TGTAACGCAA ATGCTGGCGC TGATGGAAAT CTCAAAATGC GGCGCTCCGG CCTTTTTGAT TACCAACGGC CAATGCATTC ACAGTATGCG CCGTTTTGGT TCCGCAGAAC AACTGCGTAA AACAGCAGAA AGTACTCTGG CCACCGGCGA TCCAGCATAT GCGCTAGCCT TAACAGAACC TGGCGCGGGC TCTGATAATA ATAGCGCCAC AACAACCTGG ACGCGTAAAA ACGGCAAGGT TTATCTTAAC GGCCAAAAAA CATTTATCAC CGGTGCAAAA GAATATCCTT ACATGCTGGT TCTGGCGCGC GATACGGAGC CAAAAGATCC TAAAAAAGCG TTCACGCTTT GGTGGGTGGA CTCAAATAAA CCGGGCATAA AGATTAATCC GCTGCACAAA ATTGGCTGGC ACATGTTGAG TACATGCGAA GTTTATCTCG ATAATGTCGA GGTGGACGAA AGCGACCGGG TCGGTGAAGA AGGCATGGGT TTCCTCAATG TCATGTACAA TTTTGAGATG GAGCGTTTGA TTAATGCGGC GCGCAGTACA GGTTTCGCCG AATGCGCATT TGAAGATGCC GCCCGTTACG CCAACCAGCG TATCGCCTTT GGTAAACCCA TCGGCCATAA CCAGATGATC CAGGAAAAGC TGGCGTTAAT GGCCATCAAA ATCGAAAACA TGCGCAATAT GGTGTTGAAA GTCGCCTGGC AGGCCGATCG GGAAGAGTCA CTGCGTACCA GCGCCGCGCT GGCTAAGCTG TACTGCGCAC GCACAGCGAT GGAAGTGATT GACGATGCGA TTCAGATTAT GGGTGGGCTT GGTTATACTG ACGAAGCCCG TGTCTCCCGC TTCTGGCGCG ATGTTCGCTG CGAACGTATC GGTGGCGGCA CGGATGAAAT TATGATCTAT GTGGCAGGAC GCCAGATTCT GAAAGATTAT CAGAACAAGT AA
|
Protein sequence | MDFSLTEEQE LLLASIRELI TSNFPEEYFR TCDQTGTYPK EFMQALAENG ISMLGVPEEF GGIPADYVTQ MLALMEISKC GAPAFLITNG QCIHSMRRFG SAEQLRKTAE STLATGDPAY ALALTEPGAG SDNNSATTTW TRKNGKVYLN GQKTFITGAK EYPYMLVLAR DTEPKDPKKA FTLWWVDSNK PGIKINPLHK IGWHMLSTCE VYLDNVEVDE SDRVGEEGMG FLNVMYNFEM ERLINAARST GFAECAFEDA ARYANQRIAF GKPIGHNQMI QEKLALMAIK IENMRNMVLK VAWQADREES LRTSAALAKL YCARTAMEVI DDAIQIMGGL GYTDEARVSR FWRDVRCERI GGGTDEIMIY VAGRQILKDY QNK
|
| |