Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | SNSL254_A1441 |
Symbol | |
ID | 6482221 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Salmonella enterica subsp. enterica serovar Newport str. SL254 |
Kingdom | Bacteria |
Replicon accession | NC_011080 |
Strand | + |
Start bp | 1408314 |
End bp | 1409039 |
Gene Length | 726 bp |
Protein Length | 241 aa |
Translation table | 11 |
GC content | 51% |
IMG OID | 642736833 |
Product | hypothetical protein |
Protein accession | YP_002040587 |
Protein GI | 194445041 |
COG category | [M] Cell wall/membrane/envelope biogenesis |
COG ID | [COG3137] Putative salt-induced outer membrane protein |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 6 |
Plasmid unclonability p-value | 0.0990956 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 81 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGCTGGCGG GTGGCGTGTT CGCGTCTCTG TATGCCGCCG CCGATGATTC CGTTTTTACT GTCATGGATG ATCCCTCCAC CGCGAAAAAA CCTTTTGAAG GTAATCTGAA TGCGGGCTAC CTTGCTCAGT CTGGCAATAC TAAAAGTTCT TCCTTAACGG CTGACACGGC GATGACCTGG TATGGACAAC GTACCGCCTG GTCATTATGG GGCAATGCCA GCAATACCTC CTCTAATGAT GAACGCTCTT CAGAAAAATA TGCGGTAGGC GCGCGTAACC GTTTTAATAT GACGGATTAT GATTATACCT TTGGCCAGGC CAGTTGGCTG ACAGACCGTT TCAACGGTTA TCGTCAGCGC GACGTACTGA CCGCCGGTTA CGGGCGGCAG TTCCTTAATG GTCCAGTGCA CAGCTTCCGT TTTGAATTCG GTCCTGGGGT TCGCTATGAC GAACATACGG ACGATACCAC TGAAACGCAG CCGTTGGGTT ATGCTTCCGG CAGCTATGCC TGGCAGTTAA CTGACAATGC TAAGTTTACA CAGGGGGTGT CAGTATTTGG CGCAGAAGAC ACCACACTAA ATTCGGAAAC AGCCCTCAAT GTCGCCATTA ACGAACATTT TGGTCTAAAG GTGGGGTATA ATTTAACGTG GAACTCGCAG CCGCCTGAAT CTGCGCCTGA ACATACCGAT CGTCGCACTA CGGTAACGCT GGGCTATAAG ATGTAA
|
Protein sequence | MLAGGVFASL YAAADDSVFT VMDDPSTAKK PFEGNLNAGY LAQSGNTKSS SLTADTAMTW YGQRTAWSLW GNASNTSSND ERSSEKYAVG ARNRFNMTDY DYTFGQASWL TDRFNGYRQR DVLTAGYGRQ FLNGPVHSFR FEFGPGVRYD EHTDDTTETQ PLGYASGSYA WQLTDNAKFT QGVSVFGAED TTLNSETALN VAINEHFGLK VGYNLTWNSQ PPESAPEHTD RRTTVTLGYK M
|
| |