Gene SNSL254_A1407 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSNSL254_A1407 
Symbol 
ID6482164 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSalmonella enterica subsp. enterica serovar Newport str. SL254 
KingdomBacteria 
Replicon accessionNC_011080 
Strand+ 
Start bp1376910 
End bp1377461 
Gene Length552 bp 
Protein Length183 aa 
Translation table11 
GC content57% 
IMG OID642736799 
Producthypothetical protein 
Protein accessionYP_002040553 
Protein GI194443807 
COG category[C] Energy production and conversion 
COG ID[COG0778] Nitroreductase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones4 
Plasmid unclonability p-value0.0175478 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones61 
Fosmid unclonability p-value0.348646 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGATGCAC TAGAACTGCT GGTCAACCGT CGTAGCGCCT CTCGTCTCGC AGAACCGGCG 
CCTGTCGGAG AGCAATTACA GAACATTCTG CGGGCGGGAA TGCGTGTTCC CGATCATAAA 
TCTCTACAGC CGTGGCGTTT TTTTGTGATT GAAGGAGAGG GGCGCGACCG CTTCAGCGCC 
GTGCTTGAAC GAGGCGCTGT CGCTGCCGGA GGCGATGAGA AAGCGATCGA AAAAGCGCGT 
AATTCGCCGT TTCGCGCGCC GCTGATCATT ACCGTGGTGG CGAAATGCGA AGAAAACCAT 
AAGGTTCCCG TGTGGGAACA GGAGATGTCT GCCGGATGCG CGGTGATGGC GATGCAAATG 
GCGGCGATTG CGCAAGGGTT TAATGGTATC TGGCGTAGCG GCGCATTAAC GGAGAGCGCT 
ATCGTGCGGG AAGCCTTTGA GTGCCGCCCG CAGGATAAAA TTGTTGGTTT TCTCTATCTC 
GGCACGCCGC AGCTCAAAGC GTCAACGACG ATCAGTACCC CCGACCCCAC GCCGTTTGTG 
CGTTATTTCT GA
 
Protein sequence
MDALELLVNR RSASRLAEPA PVGEQLQNIL RAGMRVPDHK SLQPWRFFVI EGEGRDRFSA 
VLERGAVAAG GDEKAIEKAR NSPFRAPLII TVVAKCEENH KVPVWEQEMS AGCAVMAMQM 
AAIAQGFNGI WRSGALTESA IVREAFECRP QDKIVGFLYL GTPQLKASTT ISTPDPTPFV 
RYF