Gene SNSL254_A1375 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSNSL254_A1375 
Symbol 
ID6485077 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSalmonella enterica subsp. enterica serovar Newport str. SL254 
KingdomBacteria 
Replicon accessionNC_011080 
Strand
Start bp1352388 
End bp1353026 
Gene Length639 bp 
Protein Length212 aa 
Translation table11 
GC content47% 
IMG OID642736769 
Productleucine export protein LeuE 
Protein accessionYP_002040523 
Protein GI194445439 
COG category[E] Amino acid transport and metabolism 
COG ID[COG1280] Putative threonine efflux protein 
TIGRFAM ID[TIGR00949] The Resistance to Homoserine/Threonine (RhtB) Family protein 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.000252722 
Plasmid hitchhikingYes 
Plasmid clonabilityhitchhiker 
 

Fosmid Coverage information

Num covering fosmid clones38 
Fosmid unclonability p-value0.0000730997 
Fosmid HitchhikerYes 
Fosmid clonabilityhitchhiker 
 

Sequence

Gene sequence
GTGTTCGCGG AGTATGGTGT TCTGAATTAT TGGACGTACC TGGTTGGGGC GATTTTTATC 
GTTCTGGTGC CGGGGCCGAA TACGCTTTTT GTGCTTAAAA ACAGCGTGGG ACGCGGGGTT
AAAGGAGGAT ATCTTGCCGC ATGCGGTGTG TTTATCGGCG ATGCGATATT AATGTTTCTG
GCGTATGCGG GCGTGGCGAC GCTGATCAAA ACAACGCCGG TTCTGTTTAA CATTGTTCGC
TATCTCGGCG CGTTTTATCT GCTCTACCTT GGCGCAAAAA TCCTTTACGC CACGCTGACC
TCAAAAGGGC GTGCGGCGAC GGAAACGGTA GTTCCTTTTG GCGCTATTTT TAAGCGTGCT
TTAATTCTTA GCCTGACGAA TCCTAAAGCC ATACTTTTTT ATGTTTCCTT TTTTGTGCAA
TTTATTGATG TTACTGCGCC GCATACTGGG GTGTCATTTT TTATTTTGGC CACCACCCTT
GAAATCGTCA GTTTTTGCTA TCTGAGCTTT TTAATTCTTT CTGGCGCTTT TGTAACCCAC
TATATTGGTA CCAAAAAGAA ACTGGCAAAA GTGGGCAATT CTTTGATTGG CCTTCTTTTC
GTCGGATTTG CCGCCCGGCT GGCAACGCTC CAGTCTTAA
 
Protein sequence
MFAEYGVLNY WTYLVGAIFI VLVPGPNTLF VLKNSVGRGV KGGYLAACGV FIGDAILMFL 
AYAGVATLIK TTPVLFNIVR YLGAFYLLYL GAKILYATLT SKGRAATETV VPFGAIFKRA
LILSLTNPKA ILFYVSFFVQ FIDVTAPHTG VSFFILATTL EIVSFCYLSF LILSGAFVTH
YIGTKKKLAK VGNSLIGLLF VGFAARLATL QS