Gene SNSL254_A1374 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSNSL254_A1374 
Symbol 
ID6486814 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSalmonella enterica subsp. enterica serovar Newport str. SL254 
KingdomBacteria 
Replicon accessionNC_011080 
Strand
Start bp1351646 
End bp1352191 
Gene Length546 bp 
Protein Length181 aa 
Translation table11 
GC content47% 
IMG OID642736768 
Productchorismate mutase 
Protein accessionYP_002040522 
Protein GI194445040 
COG category[E] Amino acid transport and metabolism 
COG ID[COG1605] Chorismate mutase 
TIGRFAM ID[TIGR01806] chorismate mutase, putative 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.0000188427 
Plasmid hitchhikingNo 
Plasmid clonabilityunclonable 
 

Fosmid Coverage information

Num covering fosmid clones39 
Fosmid unclonability p-value0.000120257 
Fosmid HitchhikerYes 
Fosmid clonabilityhitchhiker 
 

Sequence

Gene sequence
ATGATTCGTC ATATCGCCAT TTTTCTTTGT TCTTTATTGA TGTGCAGCAC CACTTTTGCC 
GATTCGGTAA CATCGGTATC GCTTGGCGCA CTCTTAACCG CGCTCAATGA ACGCATGTTA
TTAATGAAAG ATGTGGCTGC TTATAAAATG AAGCACCATC TGCCGATAGA GGATTTCACG
CGTGAACAAA ATGTTTTTGC CGAGGCTGAA GAAGAAGCGA AAAATAACGG TCTGGACCCG
CATTCGATAA CCCCTTTTAT TCGTTCGCTA ATGGATGCCA GTAAAGCGAT ACAGTACCGC
TATTTAGCGC AGTGGCGAAC CGGCCCAGAA CCCTCCTTTC CGATACAAAC CTTGTCGGTC
ACCCGGCAAC GTATTCGACA ACTTGATAAT CAAATGTTGA TCATTATCAG CCAGCGCCTG
ATGGTCGGCG CTTTCAGCCA TGAGGATATG GTGTGGCTGA GAACGCACTT TAATGCGCCG
AATCTGAATG AGAGCGATAT CAGTGATGTG TTGGCATCTC TGTCTTTGGT GCGACGCGCG
CGTTAA
 
Protein sequence
MIRHIAIFLC SLLMCSTTFA DSVTSVSLGA LLTALNERML LMKDVAAYKM KHHLPIEDFT 
REQNVFAEAE EEAKNNGLDP HSITPFIRSL MDASKAIQYR YLAQWRTGPE PSFPIQTLSV
TRQRIRQLDN QMLIIISQRL MVGAFSHEDM VWLRTHFNAP NLNESDISDV LASLSLVRRA
R