Gene SNSL254_A1334 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSNSL254_A1334 
Symbol 
ID6483855 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSalmonella enterica subsp. enterica serovar Newport str. SL254 
KingdomBacteria 
Replicon accessionNC_011080 
Strand
Start bp1322642 
End bp1323283 
Gene Length642 bp 
Protein Length213 aa 
Translation table11 
GC content56% 
IMG OID642736732 
Producthypothetical protein 
Protein accessionYP_002040489 
Protein GI194443110 
COG category[R] General function prediction only 
COG ID[COG2915] Uncharacterized protein involved in purine metabolism 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones17 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones58 
Fosmid unclonability p-value0.131692 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGGCAAAGA ATTATTATGA CATCACCCTC GCGCTGTCTG GCATTTGCCA GTCGGCACGC 
CTGGTGCAAC AACTGGCGCA CCAGGGACAC TGTGATGCCG ACGCGTTGCA CGTTTCACTC
AACAGTGTCA TTGATATGAA TCCCAGTTCT ACTCTGGGCG TGTTCGGCGG CAGCGAAGCT
AACCTGCGTC TTGGTCTGGA AACACTGCTC GGCGTGCTGA ATGCCAGCAG CCGACAAGGA
CTTAACGCCG AACTGACGCG TTATACGCTT AGCCTGATGG TGCTGGAGCG CAAGCTGTCA
TCCGCCAAAG GCGCATTGAA TACGTTAGGC GATCGCATTA ACGGCCTGCA GCGCCAGCTT
GATCATTTTG ATTTACAGTC AGACACGTTA ATGAGCGCCA TGGCGGGCAT CTACGTGGAT
GTGATTAGCC CATTGGGCCC GCGCATTCAG GTGACGGGCT CCCCGGCCGT TCTGCAAAGT
CCGCAGGTGC AGGCCAAAGT CCGCGCCTCG CTACTGGCAG GCATCCGTGC AGCCGTGCTC
TGGCATCAGG TAGGCGGTGG TCGCCTACAA CTTATGTTTT CTCGTCATCG CCTGACGACT
CAGGCAAAAC AAATTCTTGC TCATTTAACC CCGGAGTTAT GA
 
Protein sequence
MAKNYYDITL ALSGICQSAR LVQQLAHQGH CDADALHVSL NSVIDMNPSS TLGVFGGSEA 
NLRLGLETLL GVLNASSRQG LNAELTRYTL SLMVLERKLS SAKGALNTLG DRINGLQRQL
DHFDLQSDTL MSAMAGIYVD VISPLGPRIQ VTGSPAVLQS PQVQAKVRAS LLAGIRAAVL
WHQVGGGRLQ LMFSRHRLTT QAKQILAHLT PEL