Gene SNSL254_A1311 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSNSL254_A1311 
Symbol 
ID6483076 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSalmonella enterica subsp. enterica serovar Newport str. SL254 
KingdomBacteria 
Replicon accessionNC_011080 
Strand
Start bp1297719 
End bp1298258 
Gene Length540 bp 
Protein Length179 aa 
Translation table11 
GC content53% 
IMG OID642736709 
Producthypothetical protein 
Protein accessionYP_002040466 
Protein GI194445937 
COG category[S] Function unknown 
COG ID[COG3134] Predicted outer membrane lipoprotein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones16 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones28 
Fosmid unclonability p-value0.0000000260311 
Fosmid HitchhikerYes 
Fosmid clonabilityhitchhiker 
 

Sequence

Gene sequence
GTGAATAAAT CAATGTTGGC GGGTATAGGG ATTGGCGTAG CGGCTGCGCT GGGTGTGGCG 
GCAGTGGCCA GTCTCAACGT ATTTGATCGT GGTCCGCAAT ATGCGCAGGT GATATCGGCT
AAACCGATTA AAGAGACGGT AAAAACGCCG CGTCAGGAGT GCCGTAATGT CACGGTCACG
CATCGCAGAC CGGTTCAGGA CGAAAACCGT ATTGCCGGCT CGGTGCTTGG CGCAGTAGCA
GGCGGCGTGA TTGGACATCA ATTTGGCGGC GGTCGTGGTA AAGATGTGGC GACGGTCGTC
GGGGCGCTGG GCGGCGGTTA TGCTGGCAAT CAAATCCAGG GATCAATGCA GGAAAGTGAT
ACTTACACTA CCACGCAGCA ACGCTGTAAG ACGGTGTATG ACAAATCTGA AAAGATGCTT
GGCTACGACG TGACCTACAA AATTGGCGAT CAGCAGGGCA AAATCCGCAT GGATAAAGAC
CCCGGAACGC AAATTCCCCT CGACGGCAAT GGCCAACTGG TTTTGAATAA CAAAGCATAA
 
Protein sequence
MNKSMLAGIG IGVAAALGVA AVASLNVFDR GPQYAQVISA KPIKETVKTP RQECRNVTVT 
HRRPVQDENR IAGSVLGAVA GGVIGHQFGG GRGKDVATVV GALGGGYAGN QIQGSMQESD
TYTTTQQRCK TVYDKSEKML GYDVTYKIGD QQGKIRMDKD PGTQIPLDGN GQLVLNNKA