Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | SNSL254_A1289 |
Symbol | |
ID | 6486957 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Salmonella enterica subsp. enterica serovar Newport str. SL254 |
Kingdom | Bacteria |
Replicon accession | NC_011080 |
Strand | + |
Start bp | 1277057 |
End bp | 1277578 |
Gene Length | 522 bp |
Protein Length | 173 aa |
Translation table | 11 |
GC content | 52% |
IMG OID | 642736687 |
Product | hypothetical protein |
Protein accession | YP_002040444 |
Protein GI | 194442413 |
COG category | [R] General function prediction only |
COG ID | [COG1399] Predicted metal-binding, possibly nucleic acid-binding protein |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 1 |
Plasmid unclonability p-value | 0.0001847 |
Plasmid hitchhiking | Yes |
Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
Num covering fosmid clones | 17 |
Fosmid unclonability p-value | 0.000000000000230682 |
Fosmid Hitchhiker | Yes |
Fosmid clonability | hitchhiker |
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Sequence |
Gene sequence | ATGCAAAAGG TAAAATTACC CCTGACTCTT GATCCGGTTC GTACCGCTCA AAAACGCCTT GATTACCAGG GTATCTATAC CCCCGATCAG GTTGAGCGCG TTGCCGAATC TGTAGTCAGT GTGGACAGTG ATGTGGAATG CTCCATGTCG TTCGCTATCG ATAACCAGCG TCTCGCCGTT TTAACCGGCG ATGCGGTCGT TACGGTGTCG CTCGAATGCC AGCGTTGCGG GAAACCGTTT ACCCATCAGG TTCACACAAC GTATTGTTTT AGCCCTGTCC GTTCCGACGA GCAGGCTGAA GCACTGCCGG AAGCGTATGA GCCGATTGAG GTAAACGAAT TCGGCGAAAT CGATCTGCTG GCGACGGTTG AAGATGAAAT CATCCTCGCC TTGCCGGTAG TTCCGGTGCA TGATTCTGAA CACTGTGAAG TGTCCGAGGC GGACATGGTC TTTGGCGAAC TGCCTGATGA AGCGCAAAAG CCAAACCCAT TTGCCGTATT AGCCAGCTTA AAGCGTAAGT AA
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Protein sequence | MQKVKLPLTL DPVRTAQKRL DYQGIYTPDQ VERVAESVVS VDSDVECSMS FAIDNQRLAV LTGDAVVTVS LECQRCGKPF THQVHTTYCF SPVRSDEQAE ALPEAYEPIE VNEFGEIDLL ATVEDEIILA LPVVPVHDSE HCEVSEADMV FGELPDEAQK PNPFAVLASL KRK
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