Gene SNSL254_A1265 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSNSL254_A1265 
Symbol 
ID6486876 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSalmonella enterica subsp. enterica serovar Newport str. SL254 
KingdomBacteria 
Replicon accessionNC_011080 
Strand
Start bp1254912 
End bp1255559 
Gene Length648 bp 
Protein Length215 aa 
Translation table11 
GC content56% 
IMG OID642736665 
Producthypothetical protein 
Protein accessionYP_002040422 
Protein GI194442700 
COG category[S] Function unknown 
COG ID[COG3132] Uncharacterized protein conserved in bacteria 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones11 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones57 
Fosmid unclonability p-value0.143853 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAAATATG AATTAACCGC CACTGAAGCG CGAGTGATTG GCTGTCTGCT GGAAAAGCAG 
GTGACAACGC CGGAACAGTA TCCGCTTTCC GTCAACGGGG TGGTGACAGC CTGTAATCAG
AAAACCAACC GTGAACCGGT GATGAACCTG ACGGAACAAG AGGTGCAGGA ACAGCTCGAT
AACCTGGTGA AACGCCACTT TTTGCGTACG GTCAGCGGGT TTGGCAACCG CGTCACCAAA
TATGAACAGC GCTTCTGTAA TTCCGAATTT GGCGATCTGA AACTTAGCGC GGCGGAAGTG
GCGCTCGTCA CTACGCTGCT GCTGCGCGGC GCGCAAACGC CCGGCGAGTT GCGTAGCCGG
GCGTCGCGGA TGCATGAATT CAGCGATATG ACGGAAGTTG AATCCACGCT GGAACGGCTT
GCCAGTCGTG AGGACGGCCC GTATGTCGTC CGTCTGGCGC GTGAACCGGG TAAGCGCGAA
AGCCGTTATA TGCACCTTTT TTGCGGCGAC GTCGATGAAC TGTCTCTCCA GACGTCTGCG
CCGGAAAGTG CGTCGGGCGA TCTTCAGTCG CGCGTCGAAG CGCTGGAAAG CGAAGTGGCG
GAGTTAAAGC AGCGGCTGGA TTCTTTGTTA GCTCACCTGG GGGAGTAA
 
Protein sequence
MKYELTATEA RVIGCLLEKQ VTTPEQYPLS VNGVVTACNQ KTNREPVMNL TEQEVQEQLD 
NLVKRHFLRT VSGFGNRVTK YEQRFCNSEF GDLKLSAAEV ALVTTLLLRG AQTPGELRSR
ASRMHEFSDM TEVESTLERL ASREDGPYVV RLAREPGKRE SRYMHLFCGD VDELSLQTSA
PESASGDLQS RVEALESEVA ELKQRLDSLL AHLGE