Gene SNSL254_A1204 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSNSL254_A1204 
Symbol 
ID6485466 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSalmonella enterica subsp. enterica serovar Newport str. SL254 
KingdomBacteria 
Replicon accessionNC_011080 
Strand
Start bp1198670 
End bp1199608 
Gene Length939 bp 
Protein Length312 aa 
Translation table11 
GC content52% 
IMG OID642736606 
Producthypothetical protein 
Protein accessionYP_002040364 
Protein GI194445325 
COG category[R] General function prediction only 
COG ID[COG1234] Metal-dependent hydrolases of the beta-lactamase superfamily III 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones12 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones62 
Fosmid unclonability p-value0.448383 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGATGAAAA AAAGCGTCGC TATGCTGGCG GTTTGTATGC TGGCGCAAAG CCACCTTGCC 
ATTGCTGCCG GTACTCCTGC GCCTCAAGAG ATCAACATTG TTTTACTGGG CACCAAAGGC
GGGCCTTCTT TGCTCAATAC AGCCAGACTA CCGCAAGCGA CGGCGCTCAC TATCGGCGAT
AAAATATGGC TGATAGATGC CGGCTACGGT GCCAGTCTGC AACTGGTGAA AAACGGCATT
CCACTGCGCA ACATCAATAC TATTTTGCTC ACCCATCTGC ACAGCGACCA CATACTGGAT
TATCCTTCCT TGCTGATGAA TGCCTGGGCA AGTGGTCTGA AAGACCATAC CATACAGGTG
TATGGCCCGC CGGGAACCCA GGCGATGACG AAGGCTAGCT GGAAGGTCTT TGACAGGGAT
ATCACGCTAC GCATGGAGGA AGAGGGGAAA CCCGATCCGC GCAACCTGGT TAAGGCGACC
GATATTGGCC AGGGCGTCAT CTATAAAGAT GAACTGGTCA CAATAAGCGC GCTAAAAGTG
CCTCATTCCC CTTTCCCGGA CGGTGAAGCG TTTGCTTACC GTTTTGATAC CCAGGGTAAG
CGAATCGTCT TCTCTGGCGA TACGTCCTGG TTTCCGCCGC TTGCAACGTT TGCTCAAGGG
GCGGATATCC TGGTACATGA GGCGGTACAT GTCCCTTCGG TAGCAAAACT GGCTAATAGT
ATTGGCAACG GAAAAACGCT GGCTGAAGCG ATTGCGTCGC ATCACACCAC GATTGAAGAT
GTCGGTAAGA TTGCTCGCGA GGCCCACGTG AAAAAACTGG TGTTAAGTCA TCTGGTGCCT
GCGACGGTTG CGGATGACGT CTGGCAACAG GAAGCCATGA AAAATTACCC GGGCCCTGTC
ATTGTCGGTC ATGACAATAT GACGATAAGC GTACCGTAA
 
Protein sequence
MMKKSVAMLA VCMLAQSHLA IAAGTPAPQE INIVLLGTKG GPSLLNTARL PQATALTIGD 
KIWLIDAGYG ASLQLVKNGI PLRNINTILL THLHSDHILD YPSLLMNAWA SGLKDHTIQV
YGPPGTQAMT KASWKVFDRD ITLRMEEEGK PDPRNLVKAT DIGQGVIYKD ELVTISALKV
PHSPFPDGEA FAYRFDTQGK RIVFSGDTSW FPPLATFAQG ADILVHEAVH VPSVAKLANS
IGNGKTLAEA IASHHTTIED VGKIAREAHV KKLVLSHLVP ATVADDVWQQ EAMKNYPGPV
IVGHDNMTIS VP